Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01652 ATGGGATCAGAAACAGAGAACAGAAAATCTCTACCTATGATCGATTTCAACGATGAAAACCTGAAACCCGGTACTCAAACATGGGTTTCCACTTGTGATGCTGTGAGGGTTGCCTTAGAGGATCACGGTGGATTCCTAGCACACTACGATAAGGTTGATCCATTGCTCAATCACTCTGTCTTCTCTGCAATGAAACAACTCTTTGACCTTCCATTACAAACAAAAATGCAGCACACCACTGATAAACCTATATATAGTTACGCAGGACAACGCCCTGATATTCCTCTGTATGAATCCATGGCCATCGATAACCCGTTGAATGCTAAAAGTTGTCACAACTACACAACCATTATGTGGCCACAAGGGAATCACCAATTCAGTGAAAGTGTGAATTCCTATGCAAAGAAAGTTGCAGAACTGGATTACACTGTTAAGAGAATGGTGTTTGGGAGCTATGGATTGGAGAATGAGAAATGTGAGCGTTTGCTTGAATCAACAGATTATGTTCTGAGATGCTACAAATATAGAACACCTGAGATCGGTGAGACCAATTTAGGGGTGCGTGCTCATACAGATTCTGGTTTTCTTACAATATTGAATCAGAGGTTAAATGGCTTAGAAGTTCAGTTGAAGAATGGAGAGTGGTTCCAGGTTGATGCCTCACCCTCCATCTTTGTTGTCTTGGCTGGTGATGCATTTATGGTATGGAGCAATGACAGAATATGTGGTTGTGTACACAGAGTATTCATGAATACAGAGGTAGAGAGATACAGTTTGGGGCTGCTTTCATATGCTGGAAAAGTGATGGAACCAGAGGAAAAATTAGTGGATGAAGAACACCCTCTTCGTTATAAACCATTCGACCATTATGGATACCTTCGTTTCTTCCTTACAGAAGAAGCTGTGAAAGCTGCTTCTAGGATCAAGGCATACTGTGGTATTTGA 945 0.4148 MGSETENRKSLPMIDFNDENLKPGTQTWVSTCDAVRVALEDHGGFLAHYDKVDPLLNHSVFSAMKQLFDLPLQTKMQHTTDKPIYSYAGQRPDIPLYESMAIDNPLNAKSCHNYTTIMWPQGNHQFSESVNSYAKKVAELDYTVKRMVFGSYGLENEKCERLLESTDYVLRCYKYRTPEIGETNLGVRAHTDSGFLTILNQRLNGLEVQLKNGEWFQVDASPSIFVVLAGDAFMVWSNDRICGCVHRVFMNTEVERYSLGLLSYAGKVMEPEEKLVDEEHPLRYKPFDHYGYLRFFLTEEAVKAASRIKAYCGI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01652 314 SUPERFAMILY Clavaminate synthase-like 9 299 - -
Viun1g01652 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 292 - -
Viun1g01652 314 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 3 301 - -
Viun1g01652 314 Gene3D - 9 312 IPR027443 -
Viun1g01652 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 270 IPR005123 -
Viun1g01652 314 Pfam 2OG-Fe(II) oxygenase superfamily 178 259 IPR044861 -
Viun1g01652 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 87 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01652 Viun-Chr1 28330466 28331904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01652 133 285 Glycosyltransferase AT5G59530 28.125 7.50e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01652 - - gmx:100817683 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00482 7 3649459 3652093 Viun1g01652 1 28330466 28331904 PCT