Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00408 ATGGGAGAAGCACCTGTTATTATTGGTCAAGACCTGCAGAATGGGAATGACAATGACTTTGAATCAAAAAGTGGGACTTTTGAAACAACCACTATCATTGGTGATAAAAAGTATGTCATTGGTGGGACTGCTGGTGAAACTTTTTTTGTGAAAGTTCAAATTCTTGACGACAACTGTCTAGGGGAATGGGTTAATGTTGTTGATCTAGGCATTAAACCCATTTCATGTAATGGCCACTCAGCCGTGCTTTTGAAAGACAGAATACTAATTCTTAAGAAAAATTCTAACCCAGATGACTCTATATGGTTTCTGGAGGTGGACACTACATATGTCAGACAGCAGCAGAAAAAAAATTTGGGGACTGAGGTTGTAGCATGGAGTAAGGGTGTGATAGGAAACGTGGAGAAACCTGTTGTTATCAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCTCTGCTCATGAAGGAATTCCCCTCTATGTTTGGCTTTTCTGTGAGCCACACAACCCGTGCCCCAAGAGGCATGGAGAAAGATGGGGTCCATTACCATTTTACGGAGAAGAATGTTATGGAGAAAGAGATTAAGGATGGCAAGTTTCTGGAGTTTGCTTCTGTCCATGGAAATCTATATGGGACCAGTGTTGAGGCTGTGGAGCTGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGGGCAAGATCCGTGAGGGCTAGTCCTCTAGAAGCCATGTTCATCTTTATCTGCCCCCCATCAATGGACGAGTTGGAGAAGCGTCTTCGTGACCGAGGGACTGAGACAGAAGAACAGGTTCTAAAGCGACTAAGAAATGCTCAAGCTGAGATTGAGCAAGGGAGATCATCAGGCATATTTGATCACATCTTATACAACGACAATCTTGAGGAGTGTTATGAGAATCTAAAGAATTTATTGGGACTTGATGGATATGCCACTCCTCCCAAGTCTGCACCAAAAGAGATAAATCTCCCAAGGGATTATTCAGTGTCAAAAATTGATAACAGAATCATCATAAATTCCACGTCTTCAAAACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGACGTGTCTTGTCTTAAAGGGGGTGCACCTGGACGGACAAGAGGACTTAATTTAGAAGCCATTGACTCGTTTTCAGAAAGCTTCAATGGCAATGGGAATGGACCAATTTGA 1209 0.4185 MGEAPVIIGQDLQNGNDNDFESKSGTFETTTIIGDKKYVIGGTAGETFFVKVQILDDNCLGEWVNVVDLGIKPISCNGHSAVLLKDRILILKKNSNPDDSIWFLEVDTTYVRQQQKKNLGTEVVAWSKGVIGNVEKPVVISGPSGVGKGTLISLLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHGNLYGTSVEAVELVSDAGKRCILDIDVQGARSVRASPLEAMFIFICPPSMDELEKRLRDRGTETEEQVLKRLRNAQAEIEQGRSSGIFDHILYNDNLEECYENLKNLLGLDGYATPPKSAPKEINLPRDYSVSKIDNRIIINSTSSKLEKESKNLIMLDVSCLKGGAPGRTRGLNLEAIDSFSESFNGNGNGPI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00408 402 FunFam Guanylate kinase 2 128 320 - -
Viun7g00408 402 SUPERFAMILY Galactose oxidase, central domain 25 113 IPR011043 -
Viun7g00408 402 CDD GMPK 137 313 - -
Viun7g00408 402 ProSitePatterns Guanylate kinase-like signature. 170 187 IPR020590 -
Viun7g00408 402 SMART gk_7 134 320 IPR008145 -
Viun7g00408 402 NCBIfam guanylate kinase 136 315 IPR017665 GO:0004385|GO:0006163
Viun7g00408 402 PANTHER GUANYLATE KINASE-RELATED 35 364 - -
Viun7g00408 402 ProSiteProfiles Guanylate kinase-like domain profile. 135 317 IPR008144 -
Viun7g00408 402 Gene3D - 132 319 IPR027417 -
Viun7g00408 402 Pfam Guanylate kinase 135 316 IPR008145 -
Viun7g00408 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 316 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00408 Viun-Chr7 3005913 3009488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00408 K00942 - gmx:100812658 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00408 7 3005913 3009488 Viun7g00408 7 3005913 3009488 ECH
Viun1g01767 1 29428798 29432156 Viun7g00408 7 3005913 3009488 PCT