Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01767 ATGGGAGAAGCACCAGCATTGCATGTTGATGACCTGCAGGATGGGGCTCAAAATGGCCTTGAATTGAAAAACGGAACTTGCAAAGCAACTGCTACCATTGGTGATAAGACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAATCTTGGAGAATGGGTTCGTCCCACTGTGAGGGGCACCAAACCCGGATCGTGCAAAGGCCTTTCAGCAGTACCGTTGGAAGACAAAATACTGATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGGTTGACACCCAATATGTTAGGCAGCAGCAAGAATATTTGGGGACTGAGGTAGTTGCATGGAGTAAAGGTGTGGTAGGAAAGGCTGAGAAGCCTGTTGTCATTAGTGGTCCTTCTGGAGTTGGCAAAGGGACATTGATATCAATGCTTATGAAGGAGTTTCCATCTATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCGAGAGGTATGGAGAAGGATGGGGTCCACTATCATTTTACTGAGAAGAGTATAATGGAGAAAGAAATCAAAGAGGGAAAGTTTCTTGAGTTTGCTTCTGTCCATGGTAATCTGTATGGAACAAGTGTTGAGGCTGTGGAACTGGTGGCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGTGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTGTATGTCCCCCGTCAATGGAGGAGCTGGAGAAGCGCCTTCGTGACCGAGGGACAGAGACTGAGGAACAGATCCTGAAGCGACTAAGGAACGCAAAGGCTGAGATTGAGCAAGGCAAATCTTCTCACATATTTGATTTCATCCTGTACAATGACAAACTTGTTGAGTCTTACGACAGACTTAAGAAACTATTGGGACTTGATGATTATGTCACTACTCCTAAATCAGGCCCTGGAGAGGTTGATCTACCAATTGACCATTCAGTGTCAAAAATTGATAACAAAATCATCATAAACCGCATTTCCTCAGGAGAGAAGGAATCAAAGAATTTGATTATATTAGATGTTTCCTCACTAAAAGGAGGTGCACCTGGACGGACCAGAGGCCTAAATTTCCAAGCCATTGGCTCGTTCTCAAATGGATTGACTGAGATAGAGGGACTTAGCTAA 1197 0.4394 MGEAPALHVDDLQDGAQNGLELKNGTCKATATIGDKTYVIGGADDGTLSIEVQIFDRNLGEWVRPTVRGTKPGSCKGLSAVPLEDKILILKKGSKPDDQIWFLEVDTQYVRQQQEYLGTEVVAWSKGVVGKAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVEAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAKAEIEQGKSSHIFDFILYNDKLVESYDRLKKLLGLDDYVTTPKSGPGEVDLPIDHSVSKIDNKIIINRISSGEKESKNLIILDVSSLKGGAPGRTRGLNFQAIGSFSNGLTEIEGLS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01767 398 FunFam Guanylate kinase 2 126 318 - -
Viun1g01767 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Viun1g01767 398 Gene3D - 24 121 IPR015915 GO:0005515
Viun1g01767 398 CDD GMPK 135 254 - -
Viun1g01767 398 PANTHER GUANYLATE KINASE-RELATED 32 333 - -
Viun1g01767 398 Gene3D - 128 320 IPR027417 -
Viun1g01767 398 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Viun1g01767 398 SMART gk_7 132 318 IPR008145 -
Viun1g01767 398 Pfam Guanylate kinase 133 314 IPR008145 -
Viun1g01767 398 SUPERFAMILY Galactose oxidase, central domain 26 112 IPR011043 -
Viun1g01767 398 NCBIfam guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Viun1g01767 398 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01767 Viun-Chr1 29428798 29432156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01767 K00942 - gmx:100808931 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01767 1 29428798 29432156 Viun1g01767 1 29428798 29432156 ECH
Viun1g01767 1 29428798 29432156 Viun7g00408 7 3005913 3009488 PCT