Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00313 ATGGATTCTTCTTCTGATCACTCTCCTTCATCATCTCTTCATTCTACTGGAGATGTTCAAAACGTTAAGTTCTGTCAATGGTGTGGTGGTCCAACGAAGCCTGGAATACCTGAAGGAGAAGAAAGATTCAGAGCCATATGTACCAGCTGTGGGAAGATTGCATATCAGAATCCAAAAATGGTAGTCGGTTGCCTCATTGAACACGATAACAAGGTCCTCCTTTGCAAGAGGAAGATTGAACCATCTTATGGCCTATGGACACTTCCTGCTGGTTATCTGGAAATGGGAGAGTCAGCTAGGGAAGGTGCCATCAGGGAAACGAGGGAAGAAGCCAATGCTGAGGTGGAAGTGATTTCTCCCTTTGCTCAGTTAGATATTCCTTTAATTGGCCAGACTTATATAATCTTCTTAGCAAGGTTGAAGAACCCACATTTTTCACCTGGCCCAGAATCATCAGAATGCCAGCTTTTCCCTCTCAATGAAATACCTTTCAACTCTCTATCCTTTTCCTCAATGGTGGTCACTTTAAATTTGTATGTTGAAGATAAAAAAGCAGGAGGAAAGCCTAAATTCCATTATGGTACCATTAACAAAAGGCCTGGTACCAGTGCTTCTGATATTCATGCGTATACTCTGGATCATCACATGCAGTCATGA 657 0.4231 MDSSSDHSPSSSLHSTGDVQNVKFCQWCGGPTKPGIPEGEERFRAICTSCGKIAYQNPKMVVGCLIEHDNKVLLCKRKIEPSYGLWTLPAGYLEMGESAREGAIRETREEANAEVEVISPFAQLDIPLIGQTYIIFLARLKNPHFSPGPESSECQLFPLNEIPFNSLSFSSMVVTLNLYVEDKKAGGKPKFHYGTINKRPGTSASDIHAYTLDHHMQS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00313 218 Gene3D - 20 56 - -
Viun7g00313 218 ProSiteProfiles Nudix hydrolase domain profile. 57 180 IPR000086 -
Viun7g00313 218 PANTHER NUDIX HYDROLASE 23 24 212 - -
Viun7g00313 218 SUPERFAMILY Nudix 23 184 IPR015797 -
Viun7g00313 218 Pfam NUDIX domain 61 162 IPR000086 -
Viun7g00313 218 Pfam Nudix N-terminal 23 56 IPR029401 -
Viun7g00313 218 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 57 209 - -
Viun7g00313 218 ProSitePatterns Nudix box signature. 91 112 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00313 Viun-Chr7 2252943 2256802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00313 K18453 - gmx:100777180 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00313 7 2252943 2256802 Viun7g00313 7 2252943 2256802 ECH
Viun1g01851 1 30174113 30178515 Viun7g00313 7 2252943 2256802 PCT