Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01851 ATGATGGTGAAGGGAATCCAGATTCAGATATGTGGATTGGTAAGTCAACGATGGATTCAGAAACCCCGCACATTCTCATCCTTCTCATTTTCCCCAATTCCACACCCTAACCCTTATTCCAAACTGCTTCCCACCAAAACCATCGTTCGTAGGGTTCGATTCGCGCCATTTCACGCTTCCTCGACACCGCTTCCTTCTGCCGGAAATGTTCGACATATTAAGTTTTGTCAGTGGTGTGGTGGTTCTACGAAGCATGATATTCCTGAAGGGGAAGAAAAGTTGAGAGCTATTTGTACGGTTTGTGGGAAGATTGCGTATCAGAATCCGAAGATGATAGTTGGCTGTCTCGTTGAACATGATAACAAGGTGCTCCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTGTGGACACTTCCTGCTGGTTATTTGGAAATTGGAGAGTCGGCTGTGGATGGTGCCATAAGAGAAACAAGGGAGGAAGCAAATGCAGATGTGGAAGTAATTTCACCATTTGCCCAACTGGATATTCCTTTAATTGGCCAAATTTATTTGATATTCTTGGCAAGGCTGAAGAAGCCGCATTTTTCACCTGGTCCAGAATCATCAGCATGCCAACTTTTTCCACTTGACGATATACCTTTTGATTCTCTATCCTTTTCATCGATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGACCGGAAAACTCAAATTCCATTATGGAACCATTAACAAAAGGCCGGGTACAAGTCCTTCTGATATTCGTGCCTATACGCTGGATCATCATATGCAGTCATGA 807 0.4325 MMVKGIQIQICGLVSQRWIQKPRTFSSFSFSPIPHPNPYSKLLPTKTIVRRVRFAPFHASSTPLPSAGNVRHIKFCQWCGGSTKHDIPEGEEKLRAICTVCGKIAYQNPKMIVGCLVEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVDGAIRETREEANADVEVISPFAQLDIPLIGQIYLIFLARLKKPHFSPGPESSACQLFPLDDIPFDSLSFSSMVVTLSLYVEDIKTGKLKFHYGTINKRPGTSPSDIRAYTLDHHMQS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01851 268 ProSitePatterns Nudix box signature. 142 163 IPR020084 GO:0016787
Viun1g01851 268 SUPERFAMILY Nudix 74 232 IPR015797 -
Viun1g01851 268 Gene3D - 71 107 - -
Viun1g01851 268 ProSiteProfiles Nudix hydrolase domain profile. 108 231 IPR000086 -
Viun1g01851 268 PANTHER NUDIX HYDROLASE 23 75 262 - -
Viun1g01851 268 Pfam NUDIX domain 113 213 IPR000086 -
Viun1g01851 268 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 108 259 - -
Viun1g01851 268 Pfam Nudix N-terminal 74 107 IPR029401 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01851 Viun-Chr1 30174113 30178515 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01851 K18453 - gmx:100808417 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01851 1 30174113 30178515 Viun1g01851 1 30174113 30178515 ECH
Viun1g01851 1 30174113 30178515 Viun7g00313 7 2252943 2256802 PCT