Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00248 ATGCTTCAGTCTCGGTTAAAACCTGTAACGGCATTCGCGGCGAAGCCGTCACCGTTGGTGGCTTTCGTAACGGTAATCGTCATTGGAGTGGTGGGGTTTTATTCCCTGCATTTCCCTTTCCGTTCCGCCGCTTCCCTCGACGCCTCGCGCTTCGACCACGTGTTCCTCTCGTCCTCCTCCAACGCCACGATCTCCAGCTACCTGCGCGCGCTCACCGTGCACCCTCACCTCGCAGGAACAAAACCCGCCTCCCTAACCGCGCGCTACGTGCTCAACCACTTCACCGGCCTCGGGTTCCGAACCACCACCGCGAGGTACCGCCCGCTGTTGTCGTACCCGCTGCGCTCGTCGCTCTCGGCGCATTTTAGTGACGGTTCGAGTTTGGAGTTTCGGTTGGGGGAGGGAGAGGGGAACGGGGAGGTGGTGGCGCCGTACCACGCGTACTCGCCGTCGGGGTCGGCGTGGGCGGCGGCGGTGTTCGTGAACTACGGGCGGGAGGAGGACTTCCGGTTGCTGGCGGCGGCGGGGGTGGGGGTGGCGGGGTGCGTGGCGGTGGCCAGGAGCGGCGGTGGAGTGGGGCGTGGGGCGGTGGTGGAGGCGGCGGAGAGGCATGGTGCGGCGGCGGTGGTGGTGTTCGGGGATGGGGATACGTGGCCCCGGGGTTTTGAGAGGGGACACGTGATGAGAGGGGGGATTGGGGACCCGCTGAGTCCTGGGTGGGGTGGGGTTGATGGCGGCGAGAGTTTGGGTTTGGATGATAATGAAGTTTTGAGAAGGTTTCCTAAAATTCCTTCCATGCCTTTGTCTTCTGAGGCTGCTGAGAGGATCTTGGCCTCACTTGGTGGAGCTCCTCTGCCCTTGGATTGGAGGGGTACCCTAAAGTCCTCCAAGGTTAGGAATGTTGGTCCTGGCCCCACCATCCTCAACTTCACTTATCAGGGAGAAATGAAAGTGGCCACCATTGAAAACGTTTTTGCCATTATCAAGGGACGGGAAGAATCTGATCGCTATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGACCCCAACAGTGGGACAGCTGCCCTACTTGACATTGCTCGTAGATATGCTATTCTATTGCGTTTGGGGTGGACTCCACGGAGGACCATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACAGAGTGGGTTGAACAAAACCTTGTTAATCTTCGTTCAAAAGCTGTAGCATACCTTAATGTAGACTGTGCTGTTCAAGGGCCTAGTTTCTTTGCTGGCTCAACTCCTCAGCTAGATGATCTCCTTCTCGATATCATCAAAAAGGTCAAGGATCCTGACTCTGATGAGGGTACAACGATTTATCAGAATTGGGCAGCTGGTGGTGGAAAATCTAATATTCAAAGGCTGGGTAGAGTTGATTCTGATTTTGCTCCATTTGTGCAACATGCAGGGGTTCCATCTATTGATATGTATTATGGAAAAGATTATCCTGTCTATCACACTGCTTTCGACTCCTACAACTGGATGACAGAGTTTGGAGATCCATTCTTTCAGCGCCATGTTGCTGTTACTGGAATTTGGGGGCTTCTAGCCCTTCGCCTTGCTGATGATTCCATTATACCTTTCAATTATGTGTCTTATGCGGATCAGTTACAGGTGTACAATGACAAATTGAGCAACTTGTTAGACAAGCAAATTTCTCTACATCCACTAACTGCGTCGATTCAAGAATTTGCTTCTGCTGCCAAAGAAGCTAATGAGGAATCAGAGAAACTGAGACTGCAAGAAAATTCAGATCATTTTGTGAATATGAAGATACGAGCATTGAATGATAGACTAATGCTTGCGGAAAAAGGCTTCTTGGATGTTGACGGACTTCGAGGAAGACAATGGTTCAAGCATCTTGTTTTTGGGCCTCCCAGAGACCAAGAAAGCAAGTTGGATTTCTTCCCTGGAATCGCTGACTCTATGTCCGAGATGTTTAAAATGAGTGAAAAAGAAAGGTTGGCTGCTATTCAGCATGAGCTTTGGAGGGTTGCCAGAGCTATTCAAAGAGCTGCTTCAGCACTAAGAGGAGATTTGGCCTAA 2100 0.519 MLQSRLKPVTAFAAKPSPLVAFVTVIVIGVVGFYSLHFPFRSAASLDASRFDHVFLSSSSNATISSYLRALTVHPHLAGTKPASLTARYVLNHFTGLGFRTTTARYRPLLSYPLRSSLSAHFSDGSSLEFRLGEGEGNGEVVAPYHAYSPSGSAWAAAVFVNYGREEDFRLLAAAGVGVAGCVAVARSGGGVGRGAVVEAAERHGAAAVVVFGDGDTWPRGFERGHVMRGGIGDPLSPGWGGVDGGESLGLDDNEVLRRFPKIPSMPLSSEAAERILASLGGAPLPLDWRGTLKSSKVRNVGPGPTILNFTYQGEMKVATIENVFAIIKGREESDRYVLLGNHRDAWTYGAVDPNSGTAALLDIARRYAILLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLRSKAVAYLNVDCAVQGPSFFAGSTPQLDDLLLDIIKKVKDPDSDEGTTIYQNWAAGGGKSNIQRLGRVDSDFAPFVQHAGVPSIDMYYGKDYPVYHTAFDSYNWMTEFGDPFFQRHVAVTGIWGLLALRLADDSIIPFNYVSYADQLQVYNDKLSNLLDKQISLHPLTASIQEFASAAKEANEESEKLRLQENSDHFVNMKIRALNDRLMLAEKGFLDVDGLRGRQWFKHLVFGPPRDQESKLDFFPGIADSMSEMFKMSEKERLAAIQHELWRVARAIQRAASALRGDLA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00248 699 FunFam Os01g0740650 protein 314 545 - -
Viun7g00248 699 SUPERFAMILY PA domain 109 325 IPR046450 -
Viun7g00248 699 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 546 697 - -
Viun7g00248 699 Pfam PA domain 139 234 IPR003137 -
Viun7g00248 699 CDD M28_PSMA_like 319 546 - -
Viun7g00248 699 SUPERFAMILY Transferrin receptor-like dimerisation domain 545 696 IPR036757 -
Viun7g00248 699 Gene3D - 548 699 IPR036757 -
Viun7g00248 699 Pfam Transferrin receptor-like dimerisation domain 570 694 IPR007365 -
Viun7g00248 699 SUPERFAMILY Zn-dependent exopeptidases 61 542 - -
Viun7g00248 699 Gene3D Zn peptidases 62 545 - -
Viun7g00248 699 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 23 696 IPR039373 -
Viun7g00248 699 Pfam Peptidase family M28 323 511 IPR007484 -
Viun7g00248 699 Coils Coil 579 599 - -
Viun7g00248 699 Gene3D - 116 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00248 Viun-Chr7 1740538 1747093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00248 K01301 - gmx:100817485 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00248 7 1740538 1747093 Viun7g00248 7 1740538 1747093 ECH
Viun1g02658 1 36428635 36432768 Viun7g00248 7 1740538 1747093 PCT