Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00162 ATGCCTCCTCCAACTTCTCATGTTTTCTCTATACTCTGTTTTCTCTCTGTCTTCATCTTCACTTCATCATCCACACCCAACACCATCACCCTCCCTCTCTCCCATTTATTCACCAACCACCCTTCTTCGCAGCCATTCCAGACCCTCAAACTCGCTGTTTCAACTTCCATCACAAGAGCCCACCACCTCAAAAATCGCCAACCCAACCCAATCAAAACCCAAATCCACCCGAAAAGATACGGCGGATACTCCATCGACCTCGATTTCGGAACCCCGCCGCAAACCTTCACCTTTATTCTCGACACCGGAAGCACCCTCGTCTGGTTCCCGTGCTCCTCCCACTACCTCTGCTCAAATTGCAACTCCTTCCACAATGCACCCAAATCTTTCATCCCCAAGAACTCTTCTTCCTCCAAGTTAGTGGGCTGCACCAACCCCAAATGCTCCTGGCTCTTCGGCGACAATGTTCAATCGCGCTGCTGCAAAAATAACACTGCCGCCGGCGCCGCCAACTGCTCACTGACATGTCCTGCTTACACTGTCCAATACGGGCTGGGCTCAACCGCGGGCTTTCTCCTCTCGGAAAACCTCAACTTTCCCGGGAAAATCCTTCCCGATTTTCTCGTCGGCTGCTCCATCGTCTCCGTCTACCAGCCCGCCGGAATCGCGGGCTTCGGCCGCGGTCCGGAGTCCCTGCCGTCGCAGATGAACCTCACCGGATTCTCTTACTGCTTACTCTCTCACCAGTTCGACGAATCGCCGGAAACCAGCGACCTCGTCTTGCACACTTTCTCCTCCGACAACAAAAGAACAAACGGCGTCAGCTACACGCCGTTCCGGAAAAACCCGTCGAGCAAAAACCCCGCGTTCGGTGCGTACTATTACCTCACTCTCAGGAGAATCGTCGTTGGGGAGAAGCGCGTGCGCGTTCCGAAGAGGCTTCTGGAGCCTGACGCTGACGGTAACGGTGGGTCTATCGTGGACTCCGGGTCCACCTTCACGTTCATGGAGAGGCCAATTTTTGATCTGGTGGCGCAGGAGTTTGCGAAGCAGGTGAACTACACGCGCGCGAGGGAGGTGGAGAAAAAATCCGGGCTGAGTCCGTGTTTTGTGGTGTCTGGAACGGCGTCGTTTCCGGAGCTCCGGTTTGAGTTCAGGGGTGGCGCGAAGATGAGTCTGCCGCTGACGAATTATTTCTCGTTGGTCGGGAAATCCGACGTGGCGTGTTTGACTATTGTGTCTGATGACGTGGCGGGTCCTGGCGTGGCGGGTGGGCCCGCTGTGATATTGGGGAACTATCAGCAGCAGAATTTCTACGTTGAGTATGACTTGAAAAACGAGAGGTTCGGGTTTCGGAGTCAGAGTTGCAAAACGCGCGTTTAA 1383 0.5459 MPPPTSHVFSILCFLSVFIFTSSSTPNTITLPLSHLFTNHPSSQPFQTLKLAVSTSITRAHHLKNRQPNPIKTQIHPKRYGGYSIDLDFGTPPQTFTFILDTGSTLVWFPCSSHYLCSNCNSFHNAPKSFIPKNSSSSKLVGCTNPKCSWLFGDNVQSRCCKNNTAAGAANCSLTCPAYTVQYGLGSTAGFLLSENLNFPGKILPDFLVGCSIVSVYQPAGIAGFGRGPESLPSQMNLTGFSYCLLSHQFDESPETSDLVLHTFSSDNKRTNGVSYTPFRKNPSSKNPAFGAYYYLTLRRIVVGEKRVRVPKRLLEPDADGNGGSIVDSGSTFTFMERPIFDLVAQEFAKQVNYTRAREVEKKSGLSPCFVVSGTASFPELRFEFRGGAKMSLPLTNYFSLVGKSDVACLTIVSDDVAGPGVAGGPAVILGNYQQQNFYVEYDLKNERFGFRSQSCKTRV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00162 460 SUPERFAMILY Acid proteases 80 456 IPR021109 -
Viun7g00162 460 Pfam Xylanase inhibitor C-terminal 294 452 IPR032799 -
Viun7g00162 460 ProSiteProfiles Peptidase family A1 domain profile. 83 452 IPR033121 -
Viun7g00162 460 Gene3D Acid Proteases 262 460 IPR021109 -
Viun7g00162 460 Gene3D Acid Proteases 59 254 IPR021109 -
Viun7g00162 460 FunFam Aspartic proteinase nepenthesin-2 60 259 - -
Viun7g00162 460 Pfam Xylanase inhibitor N-terminal 83 252 IPR032861 -
Viun7g00162 460 CDD pepsin_A_like_plant 82 456 IPR034161 -
Viun7g00162 460 PANTHER OS07G0603500 PROTEIN-RELATED 38 456 - -
Viun7g00162 460 FunFam Aspartyl protease family protein 265 459 - -
Viun7g00162 460 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Viun7g00162 460 PRINTS Pepsin (A1) aspartic protease family signature 325 336 IPR001461 GO:0004190|GO:0006508
Viun7g00162 460 PRINTS Pepsin (A1) aspartic protease family signature 428 443 IPR001461 GO:0004190|GO:0006508
Viun7g00162 460 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00162 Viun-Chr7 1154882 1156509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00162 70 456 Miscellaneous Gene Families AT1G44130 23.430 1.74e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00162 - - gmx:100808552 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00162 7 1154882 1156509 Viun7g00162 7 1154882 1156509 ECH
Viun1g02590 1 35969116 35970715 Viun7g00162 7 1154882 1156509 PCT