Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00133 ATGAGTTACAGAAGAGATAATCGTCCGTCTAGATCATCACTGGTAGATGGTTTTGATAGTCTGGAGGAGGGTGGTCTAAGGGCTTCTTCCTCTTACTCGCGTGAAATTAATGAGCAGGATAATGATAAAGCCATGGAGACTTTGCATGACAAAGTTTCCTTTTTGAAACGATTAACAGGTGATATACATGAGGAGGTTGAGAGTCATAACCAGTTGCTTGATCGGGTGGGTAACAAAATGGATGCGTCAAGGGGTATGATGATGGGAACCATGGATCGATTCAAGAAGGTTTTTGAGAAGAAATCAGCGAGGAAAACGTGCTCATATGATCCTAGGATATTTTACACTTGGGTAAGCACTTGTTGCTAA 369 0.4173 MSYRRDNRPSRSSLVDGFDSLEEGGLRASSSYSREINEQDNDKAMETLHDKVSFLKRLTGDIHEEVESHNQLLDRVGNKMDASRGMMMGTMDRFKKVFEKKSARKTCSYDPRIFYTWVSTCC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00133 122 CDD SNARE_Bet1 38 96 IPR039899 -
Viun7g00133 122 Gene3D - 42 106 - -
Viun7g00133 122 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 35 97 IPR000727 -
Viun7g00133 122 FunFam bet1-like SNARE 1-1 42 106 - -
Viun7g00133 122 SUPERFAMILY SNARE fusion complex 34 97 - -
Viun7g00133 122 PANTHER GOLGI SNARE BET1-RELATED 10 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00133 Viun-Chr7 841713 846682 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00133 K08504 - gmx:100818014 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02080 1 32177589 32181332 Viun7g00133 7 841713 846682 PCT