Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03065 ATGGCGAGCCTAAGAGTACGATGCATGCAGTGTGGAAGACCAATTGTGGTGCCAATGGAAGCTGCCTATAGCATGTCCATTATGTGTTATGCATGCCAAGCCCAAGCTCGGAATGCACTTCCACAAAATTATCATTTTGCCAACAACAATATCAATAATGCACCTAGTTACCCTCCTCGTCCTGGTTATGCACGTAGGTCATACAACCAATTCTATTATCCTCAGCCTTTGCAACTGATGGCTCCACCACCACCTCCTCCGTTGACCCCTTCTTCTTCCTTTGGCAACAAAAGGGCTGTGTTAGTTGGTATTAGCTATGGCAATCTGAGTAACAGTCTCAAAGGTTCTGTCAATGACGCTCAGAGCATGAAATACTTTCTCGTTAACAACTTGGATTTCCCTACCGATTCCATTCGCATCCTCACAGATGACCCAGAGGAGAAAAACCCGCTGAGAATTCCAACAAAATATAACATGCGAATGGCATTGAGGTGGTTGGTCGAAGGTTGCAGATCAGGGGACTCGTTGTTTTTTCACTTCTCTGGGCACGGATCGAGGGAAGTAGATATGAACATGGATGAGGTTGATGGATATGATGAAGCAATATGCCCCGTTGATTACGAGCACGAGGGAAAGATAGTTGACGATGAAATCAACGCCACAATCGTCAGGCCTCTCCCTCGTGGTGCCAAACTTCATGCCCTTGTTGATACCTGCTTTAGTGGCACAGTTCTTGATTTACCATTTATGTGCAGAATGAACAGAAAAGGTTATTATGGATGGGAGGATCACAGAAATCCTAGAGCTTACAAAGGCACGAGAGGAGGGTTAGCAGTTTGCATTTCAGCTTGTGATGATGATGGAAATGCAGCAGATACATCGGCCTTTAGCGGTGAGGAAAGTGCTGGTGCTTTGACTTTCAGTTTCATCCGAGCCATGCAAGAAGAACCTAATTTGACTTATGGCAACTTGCTTAATTCCATTCGCTCCACAATCCGTGGGGCTAAAGAAAAAACGTTTGGCCCAAACGATCAACAGCTTGGCATGAACAGTCGCATGCAGTATGCTCATGAGCCTCAACTCACGTCTTCTGAGAAGTTTGATATTTATACAAAGTCAATTGTTATTTGA 1131 0.4483 MASLRVRCMQCGRPIVVPMEAAYSMSIMCYACQAQARNALPQNYHFANNNINNAPSYPPRPGYARRSYNQFYYPQPLQLMAPPPPPPLTPSSSFGNKRAVLVGISYGNLSNSLKGSVNDAQSMKYFLVNNLDFPTDSIRILTDDPEEKNPLRIPTKYNMRMALRWLVEGCRSGDSLFFHFSGHGSREVDMNMDEVDGYDEAICPVDYEHEGKIVDDEINATIVRPLPRGAKLHALVDTCFSGTVLDLPFMCRMNRKGYYGWEDHRNPRAYKGTRGGLAVCISACDDDGNAADTSAFSGEESAGALTFSFIRAMQEEPNLTYGNLLNSIRSTIRGAKEKTFGPNDQQLGMNSRMQYAHEPQLTSSEKFDIYTKSIVI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03065 376 Gene3D - 69 375 - -
Viun6g03065 376 PANTHER METACASPASE-4 94 370 - -
Viun6g03065 376 Pfam Caspase domain 97 365 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03065 Viun-Chr6 33179369 33181518 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03065 K22684 - gmx:100779288 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01740 3 12608099 12610991 Viun6g03065 6 33179369 33181518 PCT