Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01740 ATGATGGAAGCTGCATCTAAATGCAGAAGGTACAGAAAGGGTGTATCTATGAATGGGTCCAAAAATATCTCTAGTTCTCAGTCAAATGAGGAAGCAAAGGTTACTTGTAGATGTTTCAAAGAAGAGTGTCACTGCTTATTGCGCTCGAGAACAAACTCACACTTTGGCAATTCAACTTTGGGACCGCACAGTTCAAAGAAAGAATGTGGAATATGCTGTCCAGTGAAAAAATTTGGATCCAAATTGTTGAAACTTGGTAATCTAGGAGGTTCAAACAAAAATGAAAATTTGCTTAGTGGGTCATTATCTCATTCAGTGGCCTCTTCCTCAGCGTTTTCTAGCACTAGCAGGTATAATAAACGAGCGGTTCTCTGTGGAATTTCTTACAGAAGGAAATTCAGACTCAGAGGAATCATCAATGATATTAGTAACATGAAGGAACTGCTGATCAAGAATTTTGACTTTCCAAATGAGTGCATACGAATCCTCACAGAAGATGAACAAAATGGCAATTTGATACCAACGAAACACAACATAATGGAGTCTTTAAGGTGGCTTGTGAAGGACTGTGAAGCAGGAGACTCATTAGTGTTTTACTTCTCGGGACACGGTTCTCAGCAGCCAGATTTCAAAGAAGATGAAATTGATGGGTTTGATGAGACTCTTTGCCCTGTTGACTATTTGATAGAAGGAATGATCATTGACAATGAAATCAACTCCACCATAGTTTGGCCACTAAAGAAAGGTGTCACACTTCATGCCATTGTTGATGCATGTCATAGCGGCACAATTCTTGATCTTCTCTTTGTTTATAATCAAGAAAGTGGCATTTGGGAGGATAACAAGCCCCCTTCAAAAGAACCTATAAGAAAACATTCGAGTGGTGGATTGGCGATTTGTCTGAGTGCTTGTGAAGATAATCAGACAGCTTGTGATAGCTCTGTTTTTGGTGGAAAGGGAATGAATGGTGTTCTGACTTATCTTTTCACAAAAGCAATAAGAGAATACCCTGGAATAACTTATGGGGGTCTCCTACAAAATATGCATCAAGAGATTAAGAAGATTAGCCGAAGTAAATGCAATAACCGCATATTGCCACATATCTTCAATCGTAAAATTGCACAGGATCCTCTTCTATCATCATCAGAGAAATTTGATGTTTCTACGACAATGTTGTCCTTGTGA 1185 0.389 MMEAASKCRRYRKGVSMNGSKNISSSQSNEEAKVTCRCFKEECHCLLRSRTNSHFGNSTLGPHSSKKECGICCPVKKFGSKLLKLGNLGGSNKNENLLSGSLSHSVASSSAFSSTSRYNKRAVLCGISYRRKFRLRGIINDISNMKELLIKNFDFPNECIRILTEDEQNGNLIPTKHNIMESLRWLVKDCEAGDSLVFYFSGHGSQQPDFKEDEIDGFDETLCPVDYLIEGMIIDNEINSTIVWPLKKGVTLHAIVDACHSGTILDLLFVYNQESGIWEDNKPPSKEPIRKHSSGGLAICLSACEDNQTACDSSVFGGKGMNGVLTYLFTKAIREYPGITYGGLLQNMHQEIKKISRSKCNNRILPHIFNRKIAQDPLLSSSEKFDVSTTMLSL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01740 394 Gene3D - 87 394 - -
Viun3g01740 394 SUPERFAMILY Caspase-like 123 337 IPR029030 -
Viun3g01740 394 Pfam Caspase domain 120 383 IPR011600 GO:0004197|GO:0006508
Viun3g01740 394 PANTHER METACASPASE-4 118 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01740 Viun-Chr3 12608099 12610991 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01740 K22684 - gmx:100796640 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01740 3 12608099 12610991 Viun3g01740 3 12608099 12610991 ECH
Viun3g01740 3 12608099 12610991 Viun6g03065 6 33179369 33181518 PCT