Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02951 ATGATGTCCCCAATGCATGTGATCCTACCCATTGTTCTCATGGTGTGCACAACAACACTGAGCCTGGCTCAGAACACTCCACAAGACTACCTTGAGGTGCACAACCAGGCTCGAGCCGAGGTTGGTGTTGGTCCACTCTCATGGAACCACACCCTTCAGGCCTATGCTCAGAGGTACGCCAATGCCAGGATCCCTGACTGCAACCTCGAACACTCTATGGGACCCTATGGCGAGAATCTGGCAGAAGGGTACGGCGAAATGAAGGGTTCTGATGCTGTCAAATTCTGGCTCACTGAGAAACCTGACTATGACTACGGTTCCAATAGTTGTGTTCACGATGAGTGTGGCCACTATACTCAGATTGTGTGGCGCAATTCTCTTCATCTCGGGTGCGCACGAGCTAAGTGCAACAATGGTTGGATGTTTGTCATCTGCAGCTATTCTCCACCGGGGAACTACGAAGGAGAACGACCTTATTGA 480 0.5104 MMSPMHVILPIVLMVCTTTLSLAQNTPQDYLEVHNQARAEVGVGPLSWNHTLQAYAQRYANARIPDCNLEHSMGPYGENLAEGYGEMKGSDAVKFWLTEKPDYDYGSNSCVHDECGHYTQIVWRNSLHLGCARAKCNNGWMFVICSYSPPGNYEGERPY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02951 159 FunFam Putative pathogenesis-related protein 1 24 159 - -
Viun6g02951 159 SMART SCP_3 25 155 IPR014044 -
Viun6g02951 159 ProSitePatterns CRISP family signature 2. 142 153 IPR018244 GO:0005576
Viun6g02951 159 Gene3D CAP 24 159 IPR035940 -
Viun6g02951 159 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Viun6g02951 159 PRINTS Allergen V5/Tpx-1 family signature 46 64 IPR001283 -
Viun6g02951 159 PRINTS Allergen V5/Tpx-1 family signature 92 105 IPR001283 -
Viun6g02951 159 PRINTS Allergen V5/Tpx-1 family signature 142 155 IPR001283 -
Viun6g02951 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 28 156 IPR001283 -
Viun6g02951 159 SUPERFAMILY PR-1-like 24 159 IPR035940 -
Viun6g02951 159 Pfam Cysteine-rich secretory protein family 31 147 IPR014044 -
Viun6g02951 159 CDD CAP_PR-1 27 159 - -
Viun6g02951 159 ProSitePatterns CRISP family signature 1. 116 126 IPR018244 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02951 Viun-Chr6 32524214 32524896 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02951 K13449 - gmx:100527778 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02951 6 32524214 32524896 Viun6g02951 6 32524214 32524896 ECH
Viun3g01626 3 11246841 11247634 Viun6g02951 6 32524214 32524896 PCT