Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02854 ATGTCTTCATATTTTTCAAGCTTTGGTACAAAAATCCCACGTATGGGGAAGGGGTACGATGATGTCTTCACAGTGACCAAGACCAAGCATGCAGTGAAGCAACCAGTTTCATGGTCCAACTATAAAGTGCCCTGCAACCTCTCAAAGCAGCACATTGGTTTTGTGTCAAAATTTCCCGTGATGGAGGAGGAGCAGCAGAAGAGGTTGGATGTTTTGGCCGAGTTATCAGAGGATTATTCCGAGGAATTGGAGGTGGCTGTTAGAGCAGTGCAGATGGCGTCTTCCCTCTGCCAGAGAGTGCAGGACACTATAATTTCCAATCAAAATCAGGTGCAGTCCAAGGATGATGATTCTCCGGTTACAGTAGCAGATTGGAGTGTTCAAGCAATTGTGAGCTGGATGTTGTCAGAATGTTTAGGGAGTCAAAATGTGTCGATTGTTGCTGAAGAAGATGTTCAAAGTCTGTCCAAAGCTAATTCATCTGAACTGTTAGAAGCCGTGGTTGAAACTGTGAATCAATGTCTAACTGAAGCACCTCGATTTGGAGTTCAGGAGCCAAAATGTGGTCTTTCAACTTCAGATGTTCTTGAAATAATTGGTCGCTGTAGCTCAACGGGGGGTCCCACCGGAAGATTTTGGGTGCTGGATCCTGTTGATGGCACATTGGGTTTTGTACGTGGAGATCAATATGCTGTAGCTCTAGCACTCATAGAGGATGGAGAAGTGAAGCTTGGTGTTCTTGGATGTCCTAATTACCCAATGAGGAAGGAATGGTTAAGTTATCATCACCGCTATCATAGGATTATATCCAAGTTGACTCCTCCAACTGCTGAAACTTGGAACAAAGGTTGTGTACTATATGCTAAAAGGGGTAGTGGGAAGGCTTGGATGCAACCGCTGCTCCATGTCAATAAGATGTTTGTGTGGCCAAACCATGCAAAACAAGTTTCTGTCTCTCCTATTGACAATCCTGCACTTGCCACCTTCTGTGAACCAGTTGAGAAGGCCAATTCAAGCCATTCTTTTACTGCAGGGCTGGCTCACACTATTGGTCTCAGGAAACAACCGTTGAGGGTATACAGCATGGTAAAGTATGCAGCAATAGCTCGTGGGGATGCTGAGGTTTTCATGAAGTTTGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCAGGTGTTATCATCATACAAGAAGCTGGTGGAATGGTAACAGATGCAGGAGGACTTCCCCTAGACTTCTCAAAAGGCATATATTTAGAAGGCCTTGATCGTGGCATAGTTGCTTGTTCTGGAGCCACACTCCATGCAAAGATCATCGATGCAGTTGATGCTAGCTGGGGCTCCTCTGGCCTCTGA 1362 0.4537 MSSYFSSFGTKIPRMGKGYDDVFTVTKTKHAVKQPVSWSNYKVPCNLSKQHIGFVSKFPVMEEEQQKRLDVLAELSEDYSEELEVAVRAVQMASSLCQRVQDTIISNQNQVQSKDDDSPVTVADWSVQAIVSWMLSECLGSQNVSIVAEEDVQSLSKANSSELLEAVVETVNQCLTEAPRFGVQEPKCGLSTSDVLEIIGRCSSTGGPTGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVKLGVLGCPNYPMRKEWLSYHHRYHRIISKLTPPTAETWNKGCVLYAKRGSGKAWMQPLLHVNKMFVWPNHAKQVSVSPIDNPALATFCEPVEKANSSHSFTAGLAHTIGLRKQPLRVYSMVKYAAIARGDAEVFMKFARAGYKEKIWDHAAGVIIIQEAGGMVTDAGGLPLDFSKGIYLEGLDRGIVACSGATLHAKIIDAVDASWGSSGL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02854 453 Gene3D - 78 306 - -
Viun6g02854 453 Gene3D - 317 447 - -
Viun6g02854 453 SUPERFAMILY Carbohydrate phosphatase 78 446 - -
Viun6g02854 453 Pfam Inositol monophosphatase family 116 447 IPR000760 -
Viun6g02854 453 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 79 451 IPR006239 GO:0006790|GO:0008441
Viun6g02854 453 ProSitePatterns Inositol monophosphatase family signature 1. 213 226 IPR020583 -
Viun6g02854 453 PANTHER PHOSPHATASE 72 450 - -
Viun6g02854 453 FunFam PAP-specific phosphatase HAL2-like 77 306 - -
Viun6g02854 453 FunFam PAP-specific phosphatase HAL2-like 317 450 - -
Viun6g02854 453 PRINTS Inositol monophosphatase superfamily signature 386 410 IPR000760 -
Viun6g02854 453 PRINTS Inositol monophosphatase superfamily signature 213 229 IPR000760 -
Viun6g02854 453 ProSitePatterns Inositol monophosphatase family signature 2. 389 403 IPR020550 GO:0046854
Viun6g02854 453 CDD PAP_phosphatase 82 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02854 Viun-Chr6 32047756 32051985 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02854 K01082 - gmx:100776247 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02854 6 32047756 32051985 Viun6g02854 6 32047756 32051985 ECH
Viun3g01551 3 10411596 10413742 Viun6g02854 6 32047756 32051985 PCT