Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01551 ATGCCTTTACATTGTTCCACTTTGTGTGCAAACATGGCACATACCTTAAAACTTGGGAAGAGAAGTGAAAACTTCACATGTAGCCATGCACAAACAAAAGATTCCTGCTTTATGTCTCAATACTATAAACCCACCAACACTCTCCAAACCCACATTGCTTCTGTGTCAAAATCTGACCAAAGTTTTTCTTCTCCTGTGATGGAGGAGGACCGAAAAGTTTTTCTTGTCTCAGAAGAAACAGAGGAACATTGCGGAGAGTTAGATGTTGCTGTTAAAGCAGTTCAGATGTCATGCTTCCTCTGTCAGAAACTACAAGACACATGGATTTCGAATTCTCAGACCAACCATCCCTACTCACCGTTCACAGTTGCAGATTGGAGTGTGAACACAATTGTCAGCTGGATATTGTCGAAGTGTTTAGGGAGTGAAAATGTCTCAATCGTAACTGAAAAGGATGCTCAGACACTATCCAACACTAATACATCAGAACTGTTGGAAGCTGTGGTTAAAACTGTGAATGAATGTCTAGCTGAAGCACTAAGATTTGGGGTTGAGGAGCCAAAATCAGCTCTGGGAACTTCAGAGGTTCTTGAAATCATCAATTGCAGTAACTCAATTGGAAGTCCTTCAGGAAGATTTTGGGCACTTAGCCCTCTTGATGGCAAAATGGGGTCTGCATGCGGTGATCAATATGCTGTAGGTTTATCACTGATAGAGGATGGTGAAGTGGTGGTTGGAGTTCTTGGCTGCCCTAACTACCCTATGAGAAAGGATTGGTTTAGCTATCATCTCAGCTATCAAAGGATGATATCTATGTTGACTCCTCCAACCTCTGAAACTTGGAACAAAGGTTGTATAATTTATGCTAAGAGAGGTAGTAGGAAAGCTTGGATCCAACCACTGCTCCATGTCAATAAGAAGTATGTGTGGCCAAACCAGGCAAAACAAGTTTCTGTCTCTTCTGTTGACAACCTAGCATTGGCTACTTTCTGCCAACCAATTGAAAAGGCCAATTCAAGCTACACTTTTACTGAGGGATTGGCTCAGAGTGTTGGTCTCAGTAATCAGCCACTAAGAGTACAAAACATAATGAAATATGCGGCAATAGCTTGTGGGCATGCTGAGGTTTTCATGAAGTTTGCAAGGGCTGGTTATAAGGAAAAAATATGGGATCATGCTGCTGGTTCTGTCATCATACAAGAGGCTGGAGGCATGGTAACAGATGCTAGGGGGCATCCCTTGGACTTCTCAAAAGGTTTAAACTTGGAAAGCCTTGATCGTGGTATAGTTGCTTGTGCTGGAACCACTTTACATGAAAAGATCATCGATGCAGTTGATGCTAGCTGGGTTTCTTCTTGTCTTTGA 1365 0.4227 MPLHCSTLCANMAHTLKLGKRSENFTCSHAQTKDSCFMSQYYKPTNTLQTHIASVSKSDQSFSSPVMEEDRKVFLVSEETEEHCGELDVAVKAVQMSCFLCQKLQDTWISNSQTNHPYSPFTVADWSVNTIVSWILSKCLGSENVSIVTEKDAQTLSNTNTSELLEAVVKTVNECLAEALRFGVEEPKSALGTSEVLEIINCSNSIGSPSGRFWALSPLDGKMGSACGDQYAVGLSLIEDGEVVVGVLGCPNYPMRKDWFSYHLSYQRMISMLTPPTSETWNKGCIIYAKRGSRKAWIQPLLHVNKKYVWPNQAKQVSVSSVDNLALATFCQPIEKANSSYTFTEGLAQSVGLSNQPLRVQNIMKYAAIACGHAEVFMKFARAGYKEKIWDHAAGSVIIQEAGGMVTDARGHPLDFSKGLNLESLDRGIVACAGTTLHEKIIDAVDASWVSSCL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01551 454 Pfam Inositol monophosphatase family 119 448 IPR000760 -
Viun3g01551 454 CDD PAP_phosphatase 86 445 - -
Viun3g01551 454 FunFam PAP-specific phosphatase HAL2-like 318 451 - -
Viun3g01551 454 PANTHER PHOSPHATASE 71 451 - -
Viun3g01551 454 Gene3D - 83 308 - -
Viun3g01551 454 PRINTS Inositol monophosphatase superfamily signature 214 230 IPR000760 -
Viun3g01551 454 PRINTS Inositol monophosphatase superfamily signature 387 411 IPR000760 -
Viun3g01551 454 SUPERFAMILY Carbohydrate phosphatase 86 446 - -
Viun3g01551 454 ProSitePatterns Inositol monophosphatase family signature 2. 390 404 IPR020550 GO:0046854
Viun3g01551 454 Gene3D - 318 448 - -
Viun3g01551 454 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 86 452 IPR006239 GO:0006790|GO:0008441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01551 Viun-Chr3 10411596 10413742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01551 K01082 - gmx:100306018 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01551 3 10411596 10413742 Viun6g02854 6 32047756 32051985 PCT