Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02826 ATGCAGCGTTTACCCACCAAGTTGATGAGCAAAATCGGTGGTCCAGTGTGCGACGTGTTCATCAACCACCGTGGGATCGACACGAAGAGGAACGTTGCGGGGTTGTTGTACGATAATCTTACGAGGATTGGAGTGAGGTCGTTCTTGGACAGCATGAACATGAAACCAGGGGACAGGCTTTTCCAACACATTGATAGAGGCATTCTAGGATGCAAGGTTGGTGTCGCTGTCTTCTCTCCTCGCTACTGTGACTCCTATTTCTGCCTCCACGAGCTCGCTCTTCTCATGGAGTCCAACAAAAGGGTCGTTCCCATTTTCTACGACGTTAAACCCTCGCAACTCAGTGTCAAGGACAACGGAACCTGTCCTCCCTCGGACCTTCAGAGATTCGCCTTTGCACTTGAAGACGCTAAGAACACCGTGGGATTGACGTTTGATTCTTTGAACGGGGATTGGTCGGAGTTGCTAAGGAATGCTTCGGAAGCGGTGATCATGAACTTGTTGGAGGTAAAGGAAGAAAGGAAGTACGCGAGGAAGCAGCGTTGA 546 0.5018 MQRLPTKLMSKIGGPVCDVFINHRGIDTKRNVAGLLYDNLTRIGVRSFLDSMNMKPGDRLFQHIDRGILGCKVGVAVFSPRYCDSYFCLHELALLMESNKRVVPIFYDVKPSQLSVKDNGTCPPSDLQRFAFALEDAKNTVGLTFDSLNGDWSELLRNASEAVIMNLLEVKEERKYARKQR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02826 181 Gene3D - 7 129 IPR035897 -
Viun6g02826 181 SMART till_3 16 162 IPR000157 GO:0007165
Viun6g02826 181 ProSiteProfiles TIR domain profile. 15 160 IPR000157 GO:0007165
Viun6g02826 181 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 142 IPR035897 -
Viun6g02826 181 PANTHER COP1-INTERACTING PROTEIN-RELATED 17 178 - -
Viun6g02826 181 Pfam TIR domain 19 114 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02826 Viun-Chr6 31913741 31914824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02826 9 146 Miscellaneous Gene Families AT1G57670 30.065 4.78e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02826 - - gmx:100806903 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02826 6 31913741 31914824 Viun6g02826 6 31913741 31914824 ECH
Viun3g01531 3 10190785 10191778 Viun6g02826 6 31913741 31914824 PCT