Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01531 ATGCAACATTTGCCAGCCACGTTGTGCCGCAAACTGGCTCGTCCAGCATGCGATGTGTTCATAAACCACCGTGGCATCGACACCAAGAGGAACATCGCGGGGTTGCTCTACGACAGTTTGACTAGGATGGAAGTGCGGTCGTTTTTGGACAGCATGAACATGAAACCTGGGGATAGGTTGTTCGATCACATCGACAGGGCCATTCTAGGGTGCAAAGTGGGTGTTACGGTGTTTTCGCCACGTTACTGCGACTCCTATTTTTGTCTCCATGAACTCGCTCTTCTCATGGAGTCAAAGAAAAGGGTTGTGCCAATCTTCTACGATGTGAAACCTTCGCAGCTTGTGGTCAAGGACAACGGAACTTGTCCCTCTAAACACCTTCAGAGATTCTCTTTGGCACTCGAGGAAGCTAAATACACTGTTGGATTGACCTTTGATTCTTTGAAAGGGGACTGGTCGGAGATATTAAGGGATGCTTCAGATGCAGTGATGATGAACTTGCTGGAGGTAGAAGAAGAGCGAAAAAATTTGAAGAGAAAACCGTGA 546 0.4762 MQHLPATLCRKLARPACDVFINHRGIDTKRNIAGLLYDSLTRMEVRSFLDSMNMKPGDRLFDHIDRAILGCKVGVTVFSPRYCDSYFCLHELALLMESKKRVVPIFYDVKPSQLVVKDNGTCPSKHLQRFSLALEEAKYTVGLTFDSLKGDWSEILRDASDAVMMNLLEVEEERKNLKRKP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01531 181 Coils Coil 160 180 - -
Viun3g01531 181 Gene3D - 13 175 IPR035897 -
Viun3g01531 181 SMART till_3 16 149 IPR000157 GO:0007165
Viun3g01531 181 ProSiteProfiles TIR domain profile. 15 138 IPR000157 GO:0007165
Viun3g01531 181 PANTHER COP1-INTERACTING PROTEIN-RELATED 14 180 - -
Viun3g01531 181 Pfam TIR domain 18 124 IPR000157 GO:0007165
Viun3g01531 181 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 138 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01531 Viun-Chr3 10190785 10191778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01531 12 146 Miscellaneous Gene Families AT1G57670 30.667 9.08e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01531 - - gmx:100798207 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01531 3 10190785 10191778 Viun6g02826 6 31913741 31914824 PCT