Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02592 ATGGACCGGCCAAGTTCGATCAATCACGACGGCGACGTTTTCATAGATGCGTTTCAAAACTTTCCCGCCGAGGGCCCGCCGGAGCCTTCCGATTCGGCTTCCAGGCTTCCGGATCCTCCACCCGAACCTAAGTCATACTATCCAGCTGCCACAATCCGGCGCCGACCAGTTCGTCGGGGTTTTTCGAGTACTCAATCGTCAGGTTCTAGCTTGGGGAGCGATTTGGTGAATGGCGATTCGAGGAGTTTTCAACACCGCACGAGGCATCGAAATCTCAAGAAAGCCGAGAATACGGAGAAACCCGATTTGGATGACCGGCAACAAGTTAATGCCTCGACGGAGGAGAACAACGAGGGCTCCACCGTAACTTCAGCTGCGAACGATGATGCAGCTTTCGACTCCGTTGACTCGGCGCCGCGACAAGGTGACTCGTCTTCGAGTTTCCTCGACCCCCGCGGGTTGGCGATTAACTTATTAGGGTTTCAGATTAAGTTAATGTTCATGTTCATAACTTACCCGCTGTTGTTCGTGTTTTATTCATGCATGTTTTTCGTGGATCCTCTGGGGACAACGAAGAGGGGCAAGGTTTTCCTTGTAGGGATTTGGAACAGAGGGTGGCGTGTTTTGTTTCGGTGCATTAGGCCTTATGTTAGTAGATGGTTCAAGGAGGACGAATCGATTTGGAGCGTGGCTTTTCGGTGGGGTTGGGGGTTTTTGTGCTCAGTCTATGTTGGATGCGTTTTGTTTGGTCTTCTAATTTCGTCGTTTGTGTTTAGTATGTTGTTGATGAAGTATTTGGTGGAGAAGCCGATTCAGATGAGGGAGGTTTTGAACTTCGATTATAGCAAACATAGCCCTGTCGCGTATGTGCCGATAATGTCGTGTGCTGGTGTTATTGGTGGTATAGGTTCCGAGTATAAGGATGATGATCGGAAGTGGGTGGGTGAACGGTTTATACCTTCTAAGCACAAGGTGCAAGTCAATGTTGAGTTAAGAGTGCCAGAGTCAGGATACAACAGAAACCTTGGGATCTTTCAGATCAGGGTAGATTTCCTATTGCCTAATGGTAAAGCTATTGCAACCTCAAGTCAACCTTGCATGTTAAGATTCAGAAGTCAGCTTATCCGCCTAATCACTACTTTCCTCAAGATTGTTCCTCTTGTTACTGGGTATACATCCGAAACTCAGACTCTGAATGTGAAGATGAGAGGTTTCGAAGAAGGAGAACTACCTACTTCGTGCTTGAAAGTGACCCTTGAGCAACGAGCAGAATATCAACCAGGTGCAGGCATTCCTGAAATATATGATGCATCTGTGATTGTTGAATCGGAACTTCCACTGTTCAAGAGGATTATTTGGCTTTGGAAGATGAGCATTTTTATATGGATCGCAATGATGGCATTCTTCACAGAGTTACTCTTTGCTCTTGTGTGTTGCACGCCTTTCATTATTCCGAAAACAAGGCAAAGGGTGGCTCCAGCTAACCGTTCTGCAACCTTAAACCGTCCTCAGGCACTAGATTGA 1524 0.4711 MDRPSSINHDGDVFIDAFQNFPAEGPPEPSDSASRLPDPPPEPKSYYPAATIRRRPVRRGFSSTQSSGSSLGSDLVNGDSRSFQHRTRHRNLKKAENTEKPDLDDRQQVNASTEENNEGSTVTSAANDDAAFDSVDSAPRQGDSSSSFLDLXRGLAINLLGFQIKLMFMFITYPLLFVFYSCMFFVDPLGTTKRGKVFLVGIWNRGWRVLFRCIRPYVSRWFKEDESIWSVAFRWGWGFLCSVYVGCVLFGLLISSFVFSMLLMKYLVEKPIQMREVLNFDYSKHSPVAYVPIMSCAGVIGGIGSEYKDDDRKWVGERFIPSKHKVQVNVELRVPESGYNRNLGIFQIRVDFLLPNGKAIATSSQPCMLRFRSQLIRLITTFLKIVPLVTGYTSETQTLNVKMRGFEEGELPTSCLKVTLEQRAEYQPGAGIPEIYDASVIVESELPLFKRIIWLWKMSIFIWIAMMAFFTELLFALVCCTPFIIPKTRQRVAPANRSATLNRPQALD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02592 508 MobiDBLite consensus disorder prediction 112 130 - -
Viun6g02592 508 MobiDBLite consensus disorder prediction 58 80 - -
Viun6g02592 508 MobiDBLite consensus disorder prediction 1 139 - -
Viun6g02592 508 Pfam Putative adipose-regulatory protein (Seipin) 252 468 IPR009617 GO:0019915
Viun6g02592 508 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 141 506 IPR009617 GO:0019915
Viun6g02592 508 MobiDBLite consensus disorder prediction 32 46 - -
Viun6g02592 508 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02592 Viun-Chr6 30481629 30484212 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02592 K19365 - gmx:100796452 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02592 6 30481629 30484212 Viun6g02592 6 30481629 30484212 ECH
Viun6g02592 6 30481629 30484212 Viun3g01283 3 8000971 8003686 ECH
Viun3g01283 3 8000971 8003686 Viun6g02592 6 30481629 30484212 PCT