Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01796 ATGGCAAAGCTAAGATCTTGGACTCAGATATGGCGTTCTATTGTCGGAATGTGCATTCTGAATTTTGTTTTGAACTTCAAGATCGTAACGTTAGCTGATGACACTGGAAGTAACAGTATTGTATCAGAAGGTGACTGCAAGAACACAAATTATCAGATTTTCCTCCCTCCACCATATCAGAATATATCCTCCACCATTTGCAAACCTGTTTGGCATTCATACGAATTGAGGTACACCAAAACAGGTGATACAACAACTATCATATTATCTGCTCCCTACACAGTTGGATGGGTGGGAATTGGATTTTCCAGGGATGGCATGATGGCTGGTTCCAGTGCGATGGTAGGATGGGTTAACAAACATGGTCATGCAAAAGTGAAGCAATTTTATCTAAGGGGTAGAAGGCAATCAGAAGTAATTGTAGACAAAGGTGAACTGCCTCTGAATACTGTACCAGCTGCAGTGGCAACAAACGGAGCTGAAATTTATATAGCTTTTCAGCTACAAGCGACAACTCCATTTGGGAAGCAACCGATTTTATTGGCTTTCAGTACTAAACGTCCACTGAACCATCATCTATCAAAACATGAAGACAAAACAGCGGTTATATTTGATTTTTCTTCGGGTTCTACGGGCCCGGTATCGAATGGGTTGATTCAGATAAGAAAGAGCCATGGAATAGTGGGTGTAATAGGGTGGGGCTTAATCCTCCCTGTGGGGGCAATTATTGCTAGGTACTTCAGGCACAAGGATCCCCTATGGTTCTACCTCCACTCAGTCATTCAATTCGTGGGATTTGCGTTTGGTCTTGCCACAGTCCTTCTTGGATTACAACTCTATAGAAGTGTGCATGTTCACATACCAGCTCACAGAGGCATAGGCATCTTTGTCCTTGTCCTAAGTATTCTTCAGATATTGGCATTTTTCTTGAGGTCAGACAAGGATTCCAAGTTTAGAAACATTTGGAATTTGTATCACAGTTGGTTTGGAAGAATGGCGCTTTTCTTTGCAGCCTTGAATATAGTGTTGGGGATGCGAGCTGCTGGTGCAGGGAATGATTGGAAGATAGGCTATGGATTCCTTGTTAGCATTATACTTGTGGCAGTTATCGTTCTCGAAGTAATGGCGTATTTGAAAAGGTCACAAAAACGTTCTCTTCCTCACACTTTCCAAATGGACTCAGTTGGAGAAGCAACCTTTCCAACCAATCTTGCTAAAGGGTGA 1224 0.4232 MAKLRSWTQIWRSIVGMCILNFVLNFKIVTLADDTGSNSIVSEGDCKNTNYQIFLPPPYQNISSTICKPVWHSYELRYTKTGDTTTIILSAPYTVGWVGIGFSRDGMMAGSSAMVGWVNKHGHAKVKQFYLRGRRQSEVIVDKGELPLNTVPAAVATNGAEIYIAFQLQATTPFGKQPILLAFSTKRPLNHHLSKHEDKTAVIFDFSSGSTGPVSNGLIQIRKSHGIVGVIGWGLILPVGAIIARYFRHKDPLWFYLHSVIQFVGFAFGLATVLLGLQLYRSVHVHIPAHRGIGIFVLVLSILQILAFFLRSDKDSKFRNIWNLYHSWFGRMALFFAALNIVLGMRAAGAGNDWKIGYGFLVSIILVAVIVLEVMAYLKRSQKRSLPHTFQMDSVGEATFPTNLAKG 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01796 407 Pfam DOMON domain 76 167 - -
Viun6g01796 407 SUPERFAMILY CBD9-like 75 214 - -
Viun6g01796 407 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 43 383 - -
Viun6g01796 407 CDD DOMON_DOH 74 139 IPR045266 -
Viun6g01796 407 Gene3D - 200 385 - -
Viun6g01796 407 SMART DOMON_3 97 184 IPR005018 -
Viun6g01796 407 CDD Cyt_b561_FRRS1_like 204 374 - -
Viun6g01796 407 SMART 561_7 224 345 IPR006593 -
Viun6g01796 407 ProSiteProfiles DOMON domain profile. 72 186 IPR005018 -
Viun6g01796 407 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01796 Viun-Chr6 25177891 25181046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01796 - - gmx:100792152 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01796 6 25177891 25181046 Viun10g02160 10 36428208 36431115 PCT