Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02160 ATGGCAAAGAGTGGATCTTGGACTCGGATATGGCCATCTTTTGTCAGGCTATGTCTTCTGAATCTTGTCTGGAATTTCAAAATCACAGCATTGGCTGATGACACTGGAAATGGTGGTGCTGCAACAGAAAACACCTGCAAGAACACAAATTATCAAACTTTCCTCCCTCCACCGTACCAGAATATCTCCCACATGATATGCACTCCAGTATGGCATACCTTTGAATTGAGGTACATCCAGAATGGTGATACCACAACTATGATAGTATCTGCTCCCTACACTATAGGGTGGGTAGGAATTGGATTTTCCAAAGATGGCATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTAGTAAACATGGTCATGGAAAAATAAAGCAATTTTACCTACGAGGAAGGAGGCAATCAGAAGTGATAATAGACAAAGGGGAACTTCCCCTCAATAATGTCCCTGCAGCTGTGGCCACTAATGGCGCTGAAATTCATTTGGCATTTCAGTTGCAGACCACAACCCCATTTCAGAAACAGCCAATTTTGTTGGCCTTTGGTAGCAAATATCCTCAGAACCACCACCTCTCCACCCATGAAGACAAAACAGCAATTGTGTTTGATTTCTCTGCAGGTTCTACGAGTCCTGTACCCCATGAATTGAATCAGAAGAGGACGAAGCATGGAATTTTGGGCATAATAGGGTGGGGTCTGATCCTGCCTGTAGGGGCAATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGCTCTATCTCCATGCAATAATTCAGTTTGTGGGATTCACATTTGGGCTTAGTACAGTCATTCTTGGATTACAACTCTATTCCAAAATGCATGCTCATATACAAGCTCACAGAGGCATAGGCATCTTTGTCCTGGTACTAAGTATTCTTCAGATATTTGCATTAATCTTGAGACCAAAGAAGGATTCCAAGATCCGAAAAATTTGGAATTGGTACCACAGTTGGTTTGGAAGGTTGGCACTCATATTTGCGGCCATTAACATAGTGTTGGGGATGCAAGCTGCTGGGGCAGGAAGTGATTGGAAGATAGGTTATGGATTCCTTTTTGGTATTATGGTTACTGCAGCGATTATTCTTGAAGTATTGGCTTATTTGAAAAGATCAGAGATTCGTTCTCTTCCTCCTAACTTCCAAATAGACCCTGTTGGAGGAGCTACATTTCCAAGAGGAATGTGA 1215 0.4263 MAKSGSWTRIWPSFVRLCLLNLVWNFKITALADDTGNGGAATENTCKNTNYQTFLPPPYQNISHMICTPVWHTFELRYIQNGDTTTMIVSAPYTIGWVGIGFSKDGMMVGSSAMVGWISKHGHGKIKQFYLRGRRQSEVIIDKGELPLNNVPAAVATNGAEIHLAFQLQTTTPFQKQPILLAFGSKYPQNHHLSTHEDKTAIVFDFSAGSTSPVPHELNQKRTKHGILGIIGWGLILPVGAIIARYFRHKDPLWLYLHAIIQFVGFTFGLSTVILGLQLYSKMHAHIQAHRGIGIFVLVLSILQIFALILRPKKDSKIRKIWNWYHSWFGRLALIFAAINIVLGMQAAGAGSDWKIGYGFLFGIMVTAAIILEVLAYLKRSEIRSLPPNFQIDPVGGATFPRGM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02160 404 CDD DOMON_DOH 73 201 IPR045266 -
Viun10g02160 404 SMART 561_7 224 345 IPR006593 -
Viun10g02160 404 Pfam Eukaryotic cytochrome b561 225 346 IPR006593 -
Viun10g02160 404 SMART DOMON_3 97 184 IPR005018 -
Viun10g02160 404 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Viun10g02160 404 ProSiteProfiles DOMON domain profile. 72 184 IPR005018 -
Viun10g02160 404 CDD Cyt_b561_FRRS1_like 204 374 - -
Viun10g02160 404 Gene3D - 193 384 - -
Viun10g02160 404 Pfam DOMON domain 77 143 - -
Viun10g02160 404 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 42 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02160 Viun-Chr10 36428208 36431115 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02160 - - gmx:100807608 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02160 10 36428208 36431115 Viun10g02160 10 36428208 36431115 ECH
Viun6g01796 6 25177891 25181046 Viun10g02160 10 36428208 36431115 PCT