Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01776 ATGGCATACGCTGCTGTTGCTATGCCTACTTCTCCAGCAGCAACCACTGCTACCATGGACATTGCAAAAGAGCACAATGGTCTTCGTCGCTCCCAATCCAGCAAAGAACTATGCACACGTTCCATTATGCAGAGGTCTTATTCTGACAACCACCTATGTTGCTCCATCAATCGCATACAAGCCACATCAGTTACACCAAAACTTAAGAGCAATCGGTCAACGGGAATTTCCCCATTTCCGTTTTCAGGCTCCATTCTCCCAAATTCGCTGCGCTCCTTTCTGTTTGATCCAGAAACAAGCAAGGATATAGGTGTGAGGGAGAAGGGGGTAAGTATTGAGGAAAACATGGTGGAAAGCAGCAAAGAAGAGAGAGTCAATAGAGCCAACTGGGTGGAGAGGCTTATGGAAATCAAGAAACATTGGCGAAATAGACTGCCAAAAGAAAGCATGGATCCAAATGTGATATGCAACGACAACAATTACGAGGAATGTGAATGTAATGGAGATGACGGTGTTTGTGTGGTGGGTGAAGACGAAGATGAGGAGGAAGTGACATACGACCGTGACTCATTCTCAGAATTTCTGGTTGAAGTGCCATGGTCTGATACCCAACTGTACTCTCAACTCGCTTTCCTGTGCAACATGGCCTATGTAATACCTCAAATCAAGGCTAAGGACTTGCGACGATACTACAACCTTCAATTTATAACATCTTCTTTGGAGAAGAAGGCCACAGTGGCAAAGTTAAAATTGAAACTTGACCAGGACTCCACTAGCGTTCCTATAGATGACTCTGTAGCCTCTCAGGGTATCACAAAGAAAGGCAAAGAAAATGCACAGAAGCATCAAATCCAACTTGCTTATGATATCGCTACCTCAGCTGCCTCTTATGTTCAATTACGAGCTAAGGACCTTTTGCACCGTGCTGCTAAGTCACAAAAGAGTGAAAATGAAGAGTCTAAACTAGGAGGAGAGACACCTCGAGAAGAGTTGGAAGGCACTTCGCGAGGCTACAAATCAGAGGTTGCTGCGTATGTAGCAGCATCCACAATGACAGCAGTGGTTGCAGCAGGGGAGAAGGAAAAACAAGAAGCGGCAAATGAACTCCAGTCACTTCATTCCTCACCTTGTGAATGGTTTGTTTGTGATGATCCCAGCAATCACACACGATGCTTTGTGATTCAGGGGTCAGATTCCCTGGCATCTTGGCAAGCAAACCTCTTTTTTGAGCCCACAAAATTTGAGGGTACAGATGTGTTTGTTCACAGAGGAATTTACGAAGCTGCAAAGGGAATATACGAGCAATTCATGCCCGAAATAATGGACCATTTGAAGAGACACGGTGATCGTGCAAGGCTTCAATTCACTGGGCACTCCCTCGGGGGCAGTCTCTCTCTTTTGGTTCATCTGATGCTGTTGACAAACAAGGTTGTGAGTCCCTCGACACTTCGACCAGTTGTGACTTTTGGCTCACCATTTGTGTTTTGTGGAGGCCATCAAATTATCCATGAACTAGGCCTAGACGAGAGCCAAATCCACTGTGTGATGATGCATAGAGATATTGTTCCCAGGGCTTTCTCCTGCAATTACCCAAATCATGTAGCTGTAGTTCTTAAGCGCTTGAACAGCTCGTTTCGGTCACATCCTTGTCTGCTGAAAAATAAGCTGTTATATTCACCACTGGGTAAAATATTCATTCTCCAACCCGATGAGAAAACGTCTCCTCCACATCCTTTGCTCCCTCGAGGAAGTGCCTTCTATGCCCTGGACAATACTAAACCTGGGTATTCTCCGAGTGTTCTTAGAACCTTCCTGAATCAACCACACCCTATTGACACACTGAGTGACCCAACAGCATATGGGTCAGAAGGCACGATTCTGAGAGACCACGATTCCAGTAACTACCTTAAAGCCGTCAATGGAGTCTTGAGGGAACATTCTATGATTCTCCTTCGCAGAGTGAGGAACCAAAGGATTAATCAGTTGTGGCCACTTTTGACATCACCCTCTCCACACTCATGGAGCCATGAACAGAACTTGGAGAGACGCAGCTTGATGACAAAGGAGATAGTCACAGGGGTTTAA 2085 0.4552 MAYAAVAMPTSPAATTATMDIAKEHNGLRRSQSSKELCTRSIMQRSYSDNHLCCSINRIQATSVTPKLKSNRSTGISPFPFSGSILPNSLRSFLFDPETSKDIGVREKGVSIEENMVESSKEERVNRANWVERLMEIKKHWRNRLPKESMDPNVICNDNNYEECECNGDDGVCVVGEDEDEEEVTYDRDSFSEFLVEVPWSDTQLYSQLAFLCNMAYVIPQIKAKDLRRYYNLQFITSSLEKKATVAKLKLKLDQDSTSVPIDDSVASQGITKKGKENAQKHQIQLAYDIATSAASYVQLRAKDLLHRAAKSQKSENEESKLGGETPREELEGTSRGYKSEVAAYVAASTMTAVVAAGEKEKQEAANELQSLHSSPCEWFVCDDPSNHTRCFVIQGSDSLASWQANLFFEPTKFEGTDVFVHRGIYEAAKGIYEQFMPEIMDHLKRHGDRARLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLRPVVTFGSPFVFCGGHQIIHELGLDESQIHCVMMHRDIVPRAFSCNYPNHVAVVLKRLNSSFRSHPCLLKNKLLYSPLGKIFILQPDEKTSPPHPLLPRGSAFYALDNTKPGYSPSVLRTFLNQPHPIDTLSDPTAYGSEGTILRDHDSSNYLKAVNGVLREHSMILLRRVRNQRINQLWPLLTSPSPHSWSHEQNLERRSLMTKEIVTGV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01776 694 SUPERFAMILY alpha/beta-Hydrolases 375 566 IPR029058 -
Viun6g01776 694 Pfam Lipase (class 3) 392 529 IPR002921 GO:0006629
Viun6g01776 694 CDD Lipase_3 375 531 - -
Viun6g01776 694 Gene3D alpha/beta hydrolase 334 554 IPR029058 -
Viun6g01776 694 MobiDBLite consensus disorder prediction 309 335 - -
Viun6g01776 694 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 11 689 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01776 Viun-Chr6 25044805 25047530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01776 1 668 Acyl Lipid Metabolism Gene Families AT3G61680 54.142 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01776 - - gmx:100790575 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01776 6 25044805 25047530 Viun10g02133 10 36218822 36222163 PCT