Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02133 ATGTTTTATTCTGCAGTTTCTGTAACATCCTCTGCAACAATGGACATCACAACAGAGAAAAAAGTGTTTCTCCACTCACTCTTCTCCAACAAAGGCTTATGCAACCATTCACCGATCACGAGGTCTCACTCTAGCAATCTTCTATGTTGTTCCTCCAACAACTTCAGAGCAGCATCAATGCAACCAAAGCATAAAGACATGAACTCCATAGTAGTTTTTCCACTTCAACTTTCCGTGTCCATTCTTCCAAATCAACTTCGCTCCTTCTTCTTTGGCCCAGAAAAGAAGAGGGAAATGAAGATGGGGCAGAAGGGTATCAATTTTAAGGAAAACACAGTGGAAAGCACCGAAGAAGAGACGATACATAGATCCAACTGGGTACAAAAATTAAGGGGAATTAAGACTTATTGGAGAGGCAAAGGGCCTAAAGAGAACATGGATTTAGATACAGTATCTGAACATGATAATGAGTGTGATTGTGATGCAGAGGATACTGTTTGTGTGGCAGGTGATGAAGAAGGAAATGGAAAAGAGGAAGATGGAGAAGAAGTGACATTTTATCGTGACTCATTCTCAAAATTTCTGGTCCCGGTTCCTTGGTCTGATACCAAACTATTCTCGAAGCTGGTTTTCCTGTGCCACATGGCTTATGTCATACCACAAATCAAGGCTAAGGACTTGGGGAGATACTATGGTCTTCAATTCGTTACATCATCTTTGAAAAAGAAAAAGAAAAGGAAAGGAGATGTGACAGAGATTAAAGCAAAACTTGATCAGGATTCTATTTGTGTGCCTATGGATAATGCCTCAGTAGCCTCTGAAAATGGCTCAGAGAAGGGTGATGATTGTGAGCAACAGAAGCATCAAATGAAGCTTATTGCATATGATATTACTGCTTCAGCTGCCTCTTATGTCCAATCACGTGCCAAGGACCTTTTGTCTCTTGCTTCTAAGCCAAAGCAGCATAGTGGTGATGAAGACTTCAATGGAAGAAAAGACTCACCTCATGAGGAAGCTGATGAAACTCCACAGGTGGACAAGTTCAAGTGTGGAGTTAATGTTGCAGCATTAACAATGACTGTGGTGGCTGCAGCAGGATCAGCAATGAATCTTCAGATGCTTCGTTCTTCATCTTGTGAATGGTTTGTTTGTGATGATCCTAAGACACACACTCGATGCTTTGCCATTCAGGGATCATATTCTGTGGCATCTTGGCAAGCAAACCTCTCATTTGAGCCTACCACATTTGAGGACACAGATGTTCTTGTTCACAGTGGAATATATGAAGCTGCCAAGGGAATATATGAACAATTCATGCCAGAAATAATGGAGCATTTGCAGAGACATGGAGAAAGTGCAAAGCTTCAATTCACTGGACATTCCCTAGGGGGCAGTCTCTCAGTTTTGGTGTATTTGATGCTACTGACCAGAAAAGTTGTGAGTCCCTCAACTCTTGAACCAGTAGTGACTTTTGGTTCTCCATTTGTGTTATGTGGAGGCCAAAAATTACTGAATGAACTTGGCCTGGATGATAGCTTCGTTCACTGTGTAATGATGCACAGAGACATTGTTCCTAGGATCTTCTCATGCAGTTTCCCTAACCATGTTATAACTGTTCTTAAGCGCTTAAAAGGCTCATTTGTATCACATCCTTGTCTCATAGAAAAGAAACTATTGTACTCACCATTGGGTAAAATGTTCATTCTGCAACCAGATGAGAAAACATCTCCTTCACATCCCTTACTGCCATCAGGAAGTGGTTTCTATGTTGTTGACAGTAGCAGATGTGGATACTCTCCAATTGTTCTAAGAACATTCCTCAATCAACCACACCCCATTGAAACACTTAGCAATCCAAAAGCTTATGGCTCAGATGGCACAGTTTTAAGAGACCATGATTGTAACAACTATCTTATAGCAGTGAATGGAGTTTTAGCACAAAATTCAAAGATTGTTGTCAGGACAAGAAGATCAAGGCAACAACGAAAAATATTCAAGAGAAAGATGAGAAAATAA 2016 0.4072 MFYSAVSVTSSATMDITTEKKVFLHSLFSNKGLCNHSPITRSHSSNLLCCSSNNFRAASMQPKHKDMNSIVVFPLQLSVSILPNQLRSFFFGPEKKREMKMGQKGINFKENTVESTEEETIHRSNWVQKLRGIKTYWRGKGPKENMDLDTVSEHDNECDCDAEDTVCVAGDEEGNGKEEDGEEVTFYRDSFSKFLVPVPWSDTKLFSKLVFLCHMAYVIPQIKAKDLGRYYGLQFVTSSLKKKKKRKGDVTEIKAKLDQDSICVPMDNASVASENGSEKGDDCEQQKHQMKLIAYDITASAASYVQSRAKDLLSLASKPKQHSGDEDFNGRKDSPHEEADETPQVDKFKCGVNVAALTMTVVAAAGSAMNLQMLRSSSCEWFVCDDPKTHTRCFAIQGSYSVASWQANLSFEPTTFEDTDVLVHSGIYEAAKGIYEQFMPEIMEHLQRHGESAKLQFTGHSLGGSLSVLVYLMLLTRKVVSPSTLEPVVTFGSPFVLCGGQKLLNELGLDDSFVHCVMMHRDIVPRIFSCSFPNHVITVLKRLKGSFVSHPCLIEKKLLYSPLGKMFILQPDEKTSPSHPLLPSGSGFYVVDSSRCGYSPIVLRTFLNQPHPIETLSNPKAYGSDGTVLRDHDCNNYLIAVNGVLAQNSKIVVRTRRSRQQRKIFKRKMRK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02133 671 Pfam Lipase (class 3) 394 530 IPR002921 GO:0006629
Viun10g02133 671 MobiDBLite consensus disorder prediction 316 344 - -
Viun10g02133 671 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 15 664 IPR043367 GO:0008970
Viun10g02133 671 MobiDBLite consensus disorder prediction 320 344 - -
Viun10g02133 671 CDD Lipase_3 345 531 - -
Viun10g02133 671 Gene3D alpha/beta hydrolase 336 556 IPR029058 -
Viun10g02133 671 SUPERFAMILY alpha/beta-Hydrolases 377 540 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02133 Viun-Chr10 36218822 36222163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02133 2 663 Acyl Lipid Metabolism Gene Families AT3G61680 47.929 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02133 - - vra:106773723 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02133 10 36218822 36222163 Viun10g02133 10 36218822 36222163 ECH
Viun6g01776 6 25044805 25047530 Viun10g02133 10 36218822 36222163 PCT