Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01756 ATGTTTGAGAGAGTGGAGGAGTTTAATATGGACAAAGTTATAGAAGAATTTGAGTTACTATCGAAGGACGCGGAAAGGGTTCAGAGGGAAACTCTGAAAAAGATTTTGGAAGATAACGCGTCAGCTGAGTATTTGCAGAGTTTAGGTCTCAATGGAAGAACTGACCCAGAGAGTTTCAAGGCCTGTGTTCCAATGGTTACCCACAAAGAATTGGAACCTTACATATACAGAATTATCGATGGCGATGCTTCTCCTATTCTCACTGGCAAGCCCATCACAACCATGTCTTTAAGTTCTGGCACCACTCAGGGGAAGCCAAAATATGTACCCTGGAACGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGAGAGTTTCCCATAAAAAATGGGAAGGCTTTGAGCTTTATATACGGAAGCAAACAGTTCAAAACAAAGGGGGGTCTGGCGGCTAGAACTGCTACAAGCAATGTGTTCAGCAATGCTGGTTATAAGTGTGCAATGAGGGCAATGCAATCCCAATGCTGCAGCCCAGACGAAGTGATATTTGGTCCTGATTTTTTCCAATCATTGTACTGTCATCTGTTGTGTGGTCTGATATTCCGGGACGAGGTTCAATTTGTGTCTTCTACATTCGCTCACAGTATCGTTCATGCTTTTAGAACCTTTGAACTAGTGTGGGAAGAGCTGTGTAATGATATCAGAGAAGGGGTTCTGAGCAGCAGGGTCACGGTACCTTCCATTCGAACAGCTATGTCTAAACTGCTGAAGCCAAACCCGAAATTAGCGAACTTGATCCACAAAAAGTGTACGGGGTTGAGCAACTGGTACGGGTTGATACCAGAGGTTTTTCCCAATGCTAAGTATGTTTATGGCATCATGACTGGGTCAATGGAGCCTTATTTGAAAAAGCTGAGGCACTATGCAGGGGAGTTGCCTTTGTTGACTGCTGACTATGGATCTTCTGAGGGATGGATTGCAGCAAATGTGAACCCACAACACCCCCCTGAGTGTGCCACATATGCTGTTCTTCCTCACATTGGTTACTTCGAATTCATTCCTCTCTCAGAGCTTGACAACACCAGTGGTGAACCAGATTTCCTTTGTATTGATCCTCAGCCCGTGAGCCTCACTCAAGTCAAGGTTGGTGAAGAGTATGAAGTTGTTATGACCAATCCAGCAGGATTGTACCGGTATAGATTGGGGGATGTGGTGAAGGTTATGGGATTCCACAATTCAACTCCAGAACTGAAGTTTATTCGGCGTAGCAGTCTTCTGCTAAACATTAACATCGACAAGAACACCGAGAAGGATTTACAGGTAGCTGTGGAAGAAGCTGCAAAGCTGTTAGCAGAAGAAAAATTAGAAGTTGTTGATTTCAGTAGCCACGTTGATGTATCGAAAGAACCGGGACACTACGTGATCTTCTGGGAAATCAGTGGGGAAGCAAGTGAAGAACTCCTCCACGAATGCTGTAACTGTTTGGACAAGTCTTTTGTTGATGCAGGCTACACCAGTTCTCGCAAAGTGAACTGCATCGGAGCCCTCGAACTGCGGGTTGTTCGGAGAGGAACATTCCAGAAGATTCTTGATCATTACCTAGGACTAGGAACCGCTGTTAGTCAGTACAAGACACCCAGATGTGTTGGTCCTACAAACGCCATGGTGCTGCAAATCTTGAGTGAAAATGTTGTGAATAACTATCTCAGTACTGCTTTCTGA 1746 0.4439 MFERVEEFNMDKVIEEFELLSKDAERVQRETLKKILEDNASAEYLQSLGLNGRTDPESFKACVPMVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQFKTKGGLAARTATSNVFSNAGYKCAMRAMQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFRDEVQFVSSTFAHSIVHAFRTFELVWEELCNDIREGVLSSRVTVPSIRTAMSKLLKPNPKLANLIHKKCTGLSNWYGLIPEVFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIAANVNPQHPPECATYAVLPHIGYFEFIPLSELDNTSGEPDFLCIDPQPVSLTQVKVGEEYEVVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQVAVEEAAKLLAEEKLEVVDFSSHVDVSKEPGHYVIFWEISGEASEELLHECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNAMVLQILSENVVNNYLSTAF 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01756 581 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 581 IPR004993 -
Viun6g01756 581 Coils Coil 10 30 - -
Viun6g01756 581 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01756 Viun-Chr6 24907352 24911883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01756 12 579 EF-hand Containing Proteins AT1G23160 38.765 6.14e-135 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01756 K14506 - gmx:100794598 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01756 6 24907352 24911883 Viun10g02121 10 36046902 36051554 PCT