Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02121 ATGTTGGAGAAAGTGGAAGAGTTTAACATGGAGAGAGTGATAGAGGAATTTGAGAGGGTAACAAAGGATGCTGAGAGGATTCAAAGGGAAACACTGAAAAAGATTCTGGAAGATAACGCTTCTGCTGAGTACTTAATGAATTTGGGTCTAAATGGAAGAACTGACCCTGAGAGTTTCAAGGCCTTTGTTCCACTGGTCACTCACAAGGACTTGGAACCTTACATCAATAGAATACTTGATGGAGATACTTCTTCTGTTCTCACCGGCAAACCAATCACAACTATGTCTTTGAGTTCTGGCACTACTCAGGGAAAGCCAAAGTTTGTACCGTGGAATGAGGAACTGTTTGACACCACATTGCAGATATATCACACTTCTTTTGCCTTCAGAAACAGGGAATTTCCCATGAACAATGGCAAAGCCTTGGGCTTTGTTTACAGCAGCAAGCAGTTCAAGACAGAAGGGGGTGTTCTAGCAGGAACTGCCACAACCAATGTGTTTCGCAGTCCAGGGTTCAGGACTGCAATGAAGGCCATTCAGTCCCCATTTTGCAGCCCTGATGAAGTTATATTTGGTCCTGATTTTCACCAATCACTGTACTGTCACCTCTTGTGTGGACTAATCTTCAGGGAAGAAATTCAAATGGTGTCTTCCACCTTTGCACACAGCATTGTGAGTGCTTTTAGGACCTTTGAGCAAGTGTGGGAGGAGCTTTGTCTTGACATCAAAGAAGGGGTGCTGAGCAGCAAGGTCACAGTGCCCTCTGTTAGGACAGCCATGTCTAAGTTGCTGAAACCTGACCCTGAGCTGGCCAACTTGATCCACAATAAGTGCATGGGACTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCAAATGTGAAGTATGTTTATGGCATCATGACTGGGTCAATGGAACCTTATTTAAAGAAGTTGAGGCATTATGCTGGAGAAGTGCCTTTGTTGACTTCAGATTATGGATCTTCTGAAGGGTGGATAGCCACCAACGTGAAACCAAGAGTGCCACCTGAATTGGCCACCTACACTGTTCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGACAGAAACTAATGCAGATGACAGTTTCCTTTGTATGGATCCTAAGCTTGTGGGGCTCACTGATGTGAAGGTTGGTGAGGAGTACGAGATAGTCATCACCAATCCAGCAGGCTTGTACAGGTACCGGCTTGGAGATGTGGTGAAGGTTGTGGGGTTCCATAACTCAGCTCCAGAAGTAAAGTTTGTTAGGCGCAACAATCTTTTGCTTAACATCAACATTGACAAGAACACAGAGAAAGATTTACAGATAGCTGTGGAAGCAGCATCGCAGTTGTTAGCAGAGGAGAATTTAGAAGTTATAGACTACACAAGCCACATAGATTTGTCCAAAGAGCCAGGGCATTATGTTATATTCTGGGAAATCAGTGGAGAAGCAAGTGAAGAAGTTCTTGGTGGATGCTGCAACTGCATGGACAAGTCTTTTGTTGATGCTGGCTACACTAGTTCTCGCAAAGTCAACTGCATTGGTGCCCTTGAACTCCGAGTTGTGAGGAGAGGAACATTCCAGAAGATTCTGGAACATTACGTGGCACTTGGATCTGCTGCAAATCAGTTCAAGACTCCAAGATACATAGGCCCTACAAACACCAGAGTGTTGCAAATATTGAATGAAAATGTTGTCAAAAACTATCTTAGTACTGCCTTCAACTAA 1740 0.4408 MLEKVEEFNMERVIEEFERVTKDAERIQRETLKKILEDNASAEYLMNLGLNGRTDPESFKAFVPLVTHKDLEPYINRILDGDTSSVLTGKPITTMSLSSGTTQGKPKFVPWNEELFDTTLQIYHTSFAFRNREFPMNNGKALGFVYSSKQFKTEGGVLAGTATTNVFRSPGFRTAMKAIQSPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQMVSSTFAHSIVSAFRTFEQVWEELCLDIKEGVLSSKVTVPSVRTAMSKLLKPDPELANLIHNKCMGLSNWYGLIPELFPNVKYVYGIMTGSMEPYLKKLRHYAGEVPLLTSDYGSSEGWIATNVKPRVPPELATYTVLPQIGYFEFIPLTETNADDSFLCMDPKLVGLTDVKVGEEYEIVITNPAGLYRYRLGDVVKVVGFHNSAPEVKFVRRNNLLLNINIDKNTEKDLQIAVEAASQLLAEENLEVIDYTSHIDLSKEPGHYVIFWEISGEASEEVLGGCCNCMDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILEHYVALGSAANQFKTPRYIGPTNTRVLQILNENVVKNYLSTAFN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02121 579 Coils Coil 10 30 - -
Viun10g02121 579 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 578 IPR004993 -
Viun10g02121 579 Pfam GH3 auxin-responsive promoter 16 554 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02121 Viun-Chr10 36046902 36051554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02121 17 576 EF-hand Containing Proteins AT1G23160 38.957 6.80e-136 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02121 K14506 - gmx:100813492 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02121 10 36046902 36051554 Viun10g02121 10 36046902 36051554 ECH
Viun6g01756 6 24907352 24911883 Viun10g02121 10 36046902 36051554 PCT