Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01678 ATGGAGACCGTGCAATCCCCAGTAACAACCACTGGTGGAGGCGGCGGCGGCGGCGGTAGTAGTAGTACTACTACTCCGAGTAGGTACGAGAACCAGAAGCGGCGAGACTGGAACACCTTCAGCCAGTATCTGCGGAACCACCGGCCGCCGCTGACGGTGGCGATGTGCAGTGGGGCGCACGTGCTGGAATTCCTGCACTACCTGGACCAATTCGGGAAGACGAAGGTGCACAACCCGACGTGCCCGTTCTTCGGGCTGCCTAACCCTCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTGGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCAGAGCCGAAAGCAACCCGTTCGGCGCCCGCGCCGTGCGGCTGTACTTGCATGATGTTCGCGAGTTTCAGGCGAAGGCGAGAGGAGTGAGCTACGAGAAGAAGAGAAAGAGGCCAAAGTCCTCCACCATCTCTAATGCAACTCCTGTTACCACTTCCCCTAATGCCACTGCTACTGCAACTTAG 543 0.6243 METVQSPVTTTGGGGGGGGSSSTTTPSRYENQKRRDWNTFSQYLRNHRPPLTVAMCSGAHVLEFLHYLDQFGKTKVHNPTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAESNPFGARAVRLYLHDVREFQAKARGVSYEKKRKRPKSSTISNATPVTTSPNATATAT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01678 180 ProSiteProfiles ALOG domain profile. 28 155 IPR006936 -
Viun6g01678 180 MobiDBLite consensus disorder prediction 148 180 - -
Viun6g01678 180 PANTHER PROTEIN G1-LIKE2 23 166 IPR040222 -
Viun6g01678 180 MobiDBLite consensus disorder prediction 1 34 - -
Viun6g01678 180 Pfam ALOG domain 21 141 IPR006936 -
Viun6g01678 180 MobiDBLite consensus disorder prediction 161 180 - -
Viun6g01678 180 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01678 Viun-Chr6 24427974 24429011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01678 - - gmx:100803965 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02117 1 32449153 32450640 Viun6g01678 6 24427974 24429011 ECH
Viun7g02461 7 28713825 28715692 Viun6g01678 6 24427974 24429011 ECH
Viun6g01678 6 24427974 24429011 Viun6g01678 6 24427974 24429011 ECH
Viun6g01678 6 24427974 24429011 Viun7g01414 7 18010002 18011817 PCT