Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02117 ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCCGACAACACCTGCAACCTCATCGCCAATAGCACCACCACCAACTTAACCACTAGTGCCACCTCTTCCTCCTCCGCTGCTTCCACCTCCATCGCCAGCAGCAGCCGCTACGAGAACCAGAAACGCCGTGACTGGAACACCTTTGGCCAATACCTCAAGAATCACCGACCCCCTCTCTCCCTCTCAAGGTGCAGCGGTGCACATGTCCTCGAATTCCTAAGGTACCTGGATCAATTTGGGAAGACGAAAGTGCACACACCGATCTGCCCCTTTTACGGGCACCCGAACCCTCCAGCACCTTGTCCATGTCCTCTGAGGCAAGCTTGGGGGAGCCTGGACGCTCTGATAGGACGGTTGCGTGCAGCTTTTGAGGAAAATGGAGGAAAACCTGAAGCGAACCCTTTTGGAGCTCGTGCTGTGAGACTCTACCTTCGCGAGGTTCGTGATCTGCAGTCGAAAGCAAGAGGAATCAGTTACGAGAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAACCCATGCCACTGCCTCATCATCCTCTCCCTCCTCCAGGTGCAAGTGCAACTCACTAG 612 0.5327 MDSNIQDFIDTCNSDNTCNLIANSTTTNLTTSATSSSSAASTSIASSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQPMPLPHHPLPPPGASATH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02117 203 MobiDBLite consensus disorder prediction 167 203 - -
Viun1g02117 203 PANTHER PROTEIN G1-LIKE2 30 183 IPR040222 -
Viun1g02117 203 ProSiteProfiles ALOG domain profile. 49 176 IPR006936 -
Viun1g02117 203 MobiDBLite consensus disorder prediction 182 197 - -
Viun1g02117 203 Pfam ALOG domain 43 162 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02117 Viun-Chr1 32449153 32450640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02117 - - gmx:100527164 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02117 1 32449153 32450640 Viun1g02117 1 32449153 32450640 ECH
Viun1g02117 1 32449153 32450640 Viun6g01678 6 24427974 24429011 ECH
Viun1g02117 1 32449153 32450640 Viun7g02461 7 28713825 28715692 ECH
Viun7g02461 7 28713825 28715692 Viun1g02117 1 32449153 32450640 ECH
Viun1g02117 1 32449153 32450640 Viun7g00102 7 660153 662022 PCT
Viun7g01414 7 18010002 18011817 Viun1g02117 1 32449153 32450640 PCT