Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04079 ATGGATAACAATAATTGGAGACCTAATCAGGGTACTGAAGCCAATATGGATACTAGTGATTGGAGAGGTGGACTGCAGCAAGAGTCACGCCAAAGAATTGTCAACAAAATAATGGACACGTTAAAAAGACATCTTCCTGTTTCTGGTCAAGAGGGACTGCATGAACTTCAGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCTGCAACAAGCCAGTCTGATTATCTACGGAAAATATCATTGAAGATGCTTACAATGGAGACTAAATCCCAGGGCAGCATGGCCAATGCTCCAAATCAAGGTGGTCCAAGTAATAAACCTCCTGATCCAGGGCTTGTAATTCCATCTCAAGTTCACAATCTTGGGCAGCAACATTCTATTCCTATGTCCAATCAATCCCAGGCACGCCAACAGCTTATGCAAAATAATATTGCATCTCAATCATCGGGTTTAACCCAGACTCCAATCCAAAATGTTGGCCAGAATAATCCTAACATGCAGAATATACCTGGACAGAATTCAGTGGGGAACACCATTAGCCAGAATTCCAACATGCAAAATATGTTTGCTGGTTCCCAGAGACAAATTCAAGGGAGGCAGCAGGTTGTTTCCCAACAACAGCAACAATCACAAAATCCACAGCAATATCTGTATCAGCAACAAATTCAACATCAGCTTATGAGGCAGAAGTTCCACCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGAATCTTTTACAACCAAATCAGCTGCAATCTTCTCAGCAACCTGTCATTCAAACATCATCTGTTATGCAGCAGGCTCCCATGATGCAGACATCTCTACCCAGCATTCAGCACAATCAACAATCTAATAATGTTCAACAATCAACACAGTCTGTGCTTCAACAACACTCCCAAGTTATCAGGCAACAGCAACCACAACAAACTTCAATCATTCATCAGCAACAAACACCAATGACTCAACAGTCAATATTACCTCCACAACAGCAACAACAACAGCAACAGCAACAACTTATGGGTGCACAGGGAAATGCCTCAAACATGCAGCATTCCCAAATACTTGGGACACAAAATAATGTTAGTGATTTGCAGCAACCACAGAGGTTACTTGCACAACAGAACAATCTCTCCAACCTGCAACAGCAGCAATTAATAAATCAGCAAAACAGCCTATCAAATATGCATCAACAGTTGGGTAATAATGTCCCTGGATTACAGCCACAGCAGGTCTTAGGACCTCAATCTGGCAACTCAGGTATGCAAACAAGCCAGCACTCTGCACACGTGCTACAACAATCACAGGTTCAAATTCAACCACAATCTCAGCAAAATGCATCAAATTTGTTACCATCTCAAGCGCAGCAGTCACAGTCTCAGGCTCCACAACAGCAATTAATGCCACAGATTCAATCTCAGCCTGCGCAATTGCAACAACAGTTGGGTTTGCAACAGCAACCAAATTCCTTGCAACGGGATATGCAACAAAGGCTTCAGGCCTCAGGTCCCTTACTTCAACAATCAACTGTTCTTGATCAGCAGAAGCAGTTATATCAATCACAAAGACCCCTTCCAGAAACTTCATCAACTTCTCTGGATTCAACAGCACAGACTGGCCAGCCAAGTGGGGGTGATTGGCAAGAAGAAGTTTATCAAAAGATTAAATCAATGAAAGAAAGTTACTTGCCAGAGTTGAATGAAATGTACCAAAAGATTGCTTCTAAACTTCAACAGCATGATTCTCTTCCACAACAACCAAAGGCAGAGCAGCTTGATAAGCTGAAGGTGTTTAAAATGATGCTGGAACGAATTATAACATTCCTTCAGGTTTCCAAGAGTAATGTCTCACCTAGTATCAAGGAGAAACTGGGTTCATATGAGAAGCAGATTATTAATTTTATAAATACAAATAGGCCTAAGAAAAACATACCTGGACAGCTTCCCCCACCACATATGCATTCCATGTCACAGTCACAACCCCAAGTTACACAAGTGCAGTCTCATGAAAATCAAATTAATTCTCAGTTGCAAACATCAAATATGCAAGGCTCTGTAACAACAATGCAGCAGAATAACATGCCAAACATGCAGCATAACTCTCTGTCTGGTGTATCTACAGCACAGCAGAGTAAGATGAATTCAATGCAACCAAATACCAATTTAGATTCAGGACCAGGAAATGCTGTAAACTCCCTACAACAGGTTCCTGTGAGCTCACTCCAACAAAACCCTGTTAGTGCTCCTCAACAAACTAATGTTAACTCCTTATCCTCACAATCCGGGGTTAATGTAATCCAGTCAAATCTTAACCCCCTTCAGCAAGGTTCCAGTATGCTTCAACACCAGCAACTAAAACAACAGGAGCAACAGATGTTACATAATCAACAAATTAAGCAACAATATCAGCGACAGTTGATGCAGAGGAAGCAACAACAGATCATGCAACACCAACAACAACAACAGCAATTACACCAGACAGCAAAGCAACAACTGCCTGCACAATTGCCGACTCATCAAATACAACAACTCCACCAAATGAATGATGCAAATGACATTAAGATGAGGCAAGGAATTGGAGTTAAGCCAGGGGTCTTTCAGCCACATCTTACATCTAGTCAACGCTCAGCTTATCCCCACCAACAGATGAAAGGGAGTCCTTTTCCTGTTTCTTCTCCTCAACTCCTGCAGGCCACATCTCCTCAGATTCCACAACACTCATCTCCTCAGGTTGACCAACAAAACCACCTTCCATCTCTCACAAAGGTTGCTACTCCTCTGCAATCAGCTAACTCACCTTTTGTAGTACCCACTCCCTCACCTCCCTTGGCTCCATCTCCTATGCCAGGGGATGCTGAAAAGCCCATTTCTGGTGTTGCATTGATATCAAATGCTGCAAATATTGGATATCAGCAATCAGGAGGTGCAACAGCACCTGCTCAATCCCTTGCCATTGGAACACCTGGAATATCAGCCTCTCCTTTACTTGCAGAGTTCACTGGTCCTGATGGTGCTCTTGGTAATGCTTTTGTATCTACATCTGGAAAGTCGACTGTTACTGAACAGCCTATTGAGCGTCTAATTAAAGCGGTGAAATCAATGTCATCAAAAACATTATGTTCTGCTGTTAGTGACATTGGTTCAGTTGTAAGCATGAACGATAGGATAGCAGGATCAGCACCAGGTAATGGATCCAGAGCTGCTGTGGGTGAAGATTTGGTTGCTATGACTAATTGTCGCCTTCAGGCAAGAAATTTTATCGCACAAGATGGTGCCAATGGAACTAGGAGGATGAAGCGCTACACTTATGCAACACCCTTGAATGTTGTATCTTCTGCTGGTAGCATGAATGACAGTATCAAGCAGTTAACTGCTTCTGAGGTCTCTGATTTGGATTCAACGGCAACATCTAGATTCAAGATGCCGAGGGTTGAGGCTAATCATTCCCTTTTGGAAGAAATTAGGGAGGTTAATCAGCGACTTATTGACACAGTAGTAGACATAAGCAATGAAGAAGTTGATCCAACAGCAGCAGCAGCTGCTGCTGAAGGGACAGAAGGAACCATTGTCAAGTGTTCTTACAATGCTGTGGCTCTCAGTCCGAGCTTAAAATCCCAGTACGCTTCAGTACAAATGTCACCAATTCAACCCTTGCGCTTGCTTGTTCCCACGAATTATCCTAATTGTTCCCCCATACTCCTCGACAAGTTTCCCGTTGAATCTGGTAAGGAGAATGAAGATCTTTCTGTGAAAGCAAAGTCAAGGTTTAGCATATCCTTACGAAGTCTATCACAACCTATGTCCCTTGGGGAGATAGCAAGGACTTGGGATGTTTGTGCTCGCACTGTTATTTCTGAGCATGCACAGCAGAGCGGTGGGGGGAGTTTCAGTTCCAAGTATGGGACTTGGGAGAATTGTTTGACCACATGA 3945 0.4304 MDNNNWRPNQGTEANMDTSDWRGGLQQESRQRIVNKIMDTLKRHLPVSGQEGLHELQKIAQRFEEKIFTAATSQSDYLRKISLKMLTMETKSQGSMANAPNQGGPSNKPPDPGLVIPSQVHNLGQQHSIPMSNQSQARQQLMQNNIASQSSGLTQTPIQNVGQNNPNMQNIPGQNSVGNTISQNSNMQNMFAGSQRQIQGRQQVVSQQQQQSQNPQQYLYQQQIQHQLMRQKFHQQQQQQQQQQQQQQQNLLQPNQLQSSQQPVIQTSSVMQQAPMMQTSLPSIQHNQQSNNVQQSTQSVLQQHSQVIRQQQPQQTSIIHQQQTPMTQQSILPPQQQQQQQQQQLMGAQGNASNMQHSQILGTQNNVSDLQQPQRLLAQQNNLSNLQQQQLINQQNSLSNMHQQLGNNVPGLQPQQVLGPQSGNSGMQTSQHSAHVLQQSQVQIQPQSQQNASNLLPSQAQQSQSQAPQQQLMPQIQSQPAQLQQQLGLQQQPNSLQRDMQQRLQASGPLLQQSTVLDQQKQLYQSQRPLPETSSTSLDSTAQTGQPSGGDWQEEVYQKIKSMKESYLPELNEMYQKIASKLQQHDSLPQQPKAEQLDKLKVFKMMLERIITFLQVSKSNVSPSIKEKLGSYEKQIINFINTNRPKKNIPGQLPPPHMHSMSQSQPQVTQVQSHENQINSQLQTSNMQGSVTTMQQNNMPNMQHNSLSGVSTAQQSKMNSMQPNTNLDSGPGNAVNSLQQVPVSSLQQNPVSAPQQTNVNSLSSQSGVNVIQSNLNPLQQGSSMLQHQQLKQQEQQMLHNQQIKQQYQRQLMQRKQQQIMQHQQQQQQLHQTAKQQLPAQLPTHQIQQLHQMNDANDIKMRQGIGVKPGVFQPHLTSSQRSAYPHQQMKGSPFPVSSPQLLQATSPQIPQHSSPQVDQQNHLPSLTKVATPLQSANSPFVVPTPSPPLAPSPMPGDAEKPISGVALISNAANIGYQQSGGATAPAQSLAIGTPGISASPLLAEFTGPDGALGNAFVSTSGKSTVTEQPIERLIKAVKSMSSKTLCSAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFIAQDGANGTRRMKRYTYATPLNVVSSAGSMNDSIKQLTASEVSDLDSTATSRFKMPRVEANHSLLEEIREVNQRLIDTVVDISNEEVDPTAAAAAAEGTEGTIVKCSYNAVALSPSLKSQYASVQMSPIQPLRLLVPTNYPNCSPILLDKFPVESGKENEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEHAQQSGGGSFSSKYGTWENCLTT 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04079 1314 MobiDBLite consensus disorder prediction 525 552 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 868 920 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 155 184 - -
Viun5g04079 1314 Coils Coil 812 832 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 935 955 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 402 501 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 693 765 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 91 118 - -
Viun5g04079 1314 FunFam Mediator of RNA polymerase II transcription subunit 15a 20 98 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 940 954 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 872 920 - -
Viun5g04079 1314 Gene3D Coactivator CBP, KIX domain 20 99 IPR036529 GO:0003712|GO:0006355
Viun5g04079 1314 MobiDBLite consensus disorder prediction 642 676 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 1 23 - -
Viun5g04079 1314 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 92 IPR036529 GO:0003712|GO:0006355
Viun5g04079 1314 MobiDBLite consensus disorder prediction 525 551 - -
Viun5g04079 1314 MobiDBLite consensus disorder prediction 246 353 - -
Viun5g04079 1314 Pfam KIX domain 19 98 IPR036546 -
Viun5g04079 1314 Coils Coil 790 810 - -
Viun5g04079 1314 Coils Coil 1156 1176 - -
Viun5g04079 1314 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 17 302 IPR044661 GO:0003713|GO:0031490
Viun5g04079 1314 MobiDBLite consensus disorder prediction 657 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04079 Viun-Chr5 48181448 48193146 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04079 K14972 - gmx:100783762 1919.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04079 5 48181448 48193146 Viun10g02776 10 40693433 40707880 PCT