Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04051 ATGCTTGGTTTCGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTTCTTGCTTTTCTTTTCCACCAGGGAGTGTTGGATGAACAATTTTTGCAGCTTCAACAGCTGCAAGATGAGGCTTCTCCAAACTTCGTCTCTGAGGTGGTCAACATTTATTTTCACGAGTCCGAGAAACTACTCAACAATCTCAGAGGATTGCTAATGGAGAAGGAGTTATCAGACTACAAGAAAATTGGAATCCATTTGAATCAGTTCATGGGTAGCAGCTCAAGCATTGGTGCGAAGAGAGTCACAAACATTTGCGTTGCATTTCGTGCTGCTACAGACCAGAGCAACCGTGCAGGATGCTTGCGAGCGTTGGAGATGCTGGAGCATGAATATTGTTATCTCAAGAACAAGTTGCATGAATTGTTCCAAATAGAGCAGCAACGTGCTTTGGTCGCTGGAGTGAGATACCCAGTGCAGAACCAATAA 474 0.4557 MLGFGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDEASPNFVSEVVNIYFHESEKLLNNLRGLLMEKELSDYKKIGIHLNQFMGSSSSIGAKRVTNICVAFRAATDQSNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALVAGVRYPVQNQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04051 157 Pfam Hpt domain 47 119 IPR008207 GO:0000160
Viun5g04051 157 FunFam Histidine-containing phosphotransfer protein 1 4 153 - -
Viun5g04051 157 Gene3D HPT domain 5 155 IPR036641 GO:0000160
Viun5g04051 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Viun5g04051 157 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Viun5g04051 157 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 11 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04051 Viun-Chr5 48049303 48050521 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04051 K14490 - gmx:100814937 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04051 5 48049303 48050521 Viun5g04051 5 48049303 48050521 ECH
Viun5g04051 5 48049303 48050521 Viun10g02749 10 40535360 40537053 PCT