Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02749 ATGCTTGGTTTGGGTGCCGACCTCTTGTGGGCCGACATGAACCGTCTCCTTGCCTTCCTCTTCCACCAGGGAGTGTTGGATGAGCAGTTCTTGCAGCTTCAGCAGCTGCAAGATGAGACCACCCCAAACTTCGTATCCGAGGTTGTCAACATCTATTTCCATGAATCAGAAAAGCTTCTCACCAATCTCAGAGCTTTGCTCATGGAGAGGGAGTTTTGGGACTATAAGAAAATGGGGAATCATTTGAATCAGTTCATGGGAAGCAGCTCCAGCATTGGCGCCAAGAGAGTTAGAAACGTTTGCGTAGCCTTTCGTGCTGCTACTGAGCAGAATAACCGTGCTGGTTGTTTGCGAGCGTTGGAGATGCTGGAGCATGAGTACTGTTATCTCAAGAACAAATTGCACGAATTGTTTCAGATTGAGCAGCAACGTGCTTTGGCTGCAGGAGTAAGGTACCCAGTGCAGGATTAG 471 0.4862 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETTPNFVSEVVNIYFHESEKLLTNLRALLMEREFWDYKKMGNHLNQFMGSSSSIGAKRVRNVCVAFRAATEQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQD 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02749 156 FunFam Histidine-containing phosphotransfer protein 1 4 153 - -
Viun10g02749 156 Pfam Hpt domain 47 116 IPR008207 GO:0000160
Viun10g02749 156 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Viun10g02749 156 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 11 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
Viun10g02749 156 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Viun10g02749 156 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02749 Viun-Chr10 40535360 40537053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02749 K14490 - gmx:100789608 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02749 10 40535360 40537053 Viun10g02749 10 40535360 40537053 ECH
Viun5g04051 5 48049303 48050521 Viun10g02749 10 40535360 40537053 PCT