Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04049 ATGCTTAGACTTCATATCATGTTCTCTTCATTTTTTATTCGCCTTCAGCTCTTCTTCTTTCTGCTATTTTCCCTTGTTTTGGGAGATAAAGCATTTACAGGAACATATGGTGTAAACTATGGTAGAATAGCAGACAACCTACCTCCCCCAGAAAGTGTGGTCACCTTACTCAAAGCAGCAAAAATCAAGAACATAAGAATATACGATGCTGATCATCATGTTCTTCGCGCATTCAAAGGTTCCGGCATTGAAATCGTGGTTGGACTCGGCAACGAATTTCTCACGGAAATGAGTGTGGGAGAGGACAGAGCCATGAGTTGGGTCAAAGAAAACGTTCAGCAATTTCTTCCAGGAACCAAAATCCGTGGAATCGCAGTGGGAAACGAGATCTTAGGAGGCACAGATATTCAACTCTGGGAAGTTCTTCTACCTGCAGCAAAGAATGTTTACAATGCCCTAAGTAAGCTTGGTCTGGAAAAAAATGTTCAAGTTTCAAGCCCACATTCTGAGGCTGTTTTCGCTAACTCTTTTCCTCCATCGTCATGCACTTTCAAGGAAGATGTTGTTCCGTATATGAAGCCTCTGTTGCAGTTTTTCTCGCAGATCGGAACTCCATTTTTCATAAATGCTTATCCCTTTCTTGCCTATAAGAACGATCCGGAACACATTGATCTTAACTATGCTCTCATGGAGAAAAGTGATGGGATTTATGATGCAAAGACTAAACTGCATTATGGGAACATGTTTGAGGCTCAGGTTGATGCGGCTTATGCAGCGTTGGAGAAGGTTGGGTTTGGGAAGATGGAAGTGATTGTTTCTGAGACTGGTTGGGCTTCGAAGGGGGATGAGAATGAAGCTGGAGCAACGGTGAAGAATGCGAGAACCTACAATCTTAATCTGCGTAAGAGGTTGCTGAAGAAGAAAGGAACCCCTTATAGGCCCAAAAAGGTGGTGAGGGCTTATATCTTTGCTTTGTTTAATGAAAATTCGAAACCTGGTCCAACGTCAGAGAGAAACTTTGGATTGTTTAAGGCTGATGGAAGCATTGCTTATGATATTGGCTTCACTGGACTTGTACCATCTTCGTCAGCTTCATCATTACTTTCCTTCAAGGGTATTGGAACCTGGTTTGTGCTGGCTTTCACAAGTTTGGTTGCTTTCTTTTTATAG 1170 0.4231 MLRLHIMFSSFFIRLQLFFFLLFSLVLGDKAFTGTYGVNYGRIADNLPPPESVVTLLKAAKIKNIRIYDADHHVLRAFKGSGIEIVVGLGNEFLTEMSVGEDRAMSWVKENVQQFLPGTKIRGIAVGNEILGGTDIQLWEVLLPAAKNVYNALSKLGLEKNVQVSSPHSEAVFANSFPPSSCTFKEDVVPYMKPLLQFFSQIGTPFFINAYPFLAYKNDPEHIDLNYALMEKSDGIYDAKTKLHYGNMFEAQVDAAYAALEKVGFGKMEVIVSETGWASKGDENEAGATVKNARTYNLNLRKRLLKKKGTPYRPKKVVRAYIFALFNENSKPGPTSERNFGLFKADGSIAYDIGFTGLVPSSSASSLLSFKGIGTWFVLAFTSLVAFFL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04049 389 FunFam Glucan endo-1,3-beta-glucosidase 14 34 360 - -
Viun5g04049 389 SUPERFAMILY (Trans)glycosidases 36 354 IPR017853 -
Viun5g04049 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 356 IPR044965 GO:0004553|GO:0005975
Viun5g04049 389 Gene3D Glycosidases 35 358 - -
Viun5g04049 389 Pfam Glycosyl hydrolases family 17 37 355 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04049 Viun-Chr5 48037620 48040231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04049 31 369 Glycoside Hydrolase AT3G15800 75.362 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04049 - - gmx:100815468 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04049 5 48037620 48040231 Viun5g04049 5 48037620 48040231 ECH
Viun5g04049 5 48037620 48040231 Viun10g02746 10 40520828 40522414 PCT