Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02746 ATGTTCTCTCACTCTTCTTCCTTCTTTCTCTGCCTTCTCTTCTTCTCCGTAACACTTTCTCACGTTTTAGGGGATAAAGTGTTTACTGGAACGTATGGAGTGAACTATGGAAGGATTGCAGATAATCTACCTTCTCCTCAGAGTGTGGTTACTCTTCTGAAAGCTGCAAAGATCAGAAACATCAGAATCTATGATGCTGATCATCAAGTTCTCAGTGCCTTCAAAGGGTCAGGGATTGGAATCATCATTGGGCTACCAAATGAGTTTCTGAGAGATATAAGCCAGGGAGAGGATCGTGCCATGAACTGGATCAAAGAAAACGTTCAGCCATTTCTTCCAGGAACAAGAATTCGTGGCATTGCAGTGGGGAATGAAATACTTGGAGGTGGAGACATGGAACTGTGGCAGGTTTTGCTTCCAGCAGCTAAAAATGTTTACACTGTACTCGCTAGGCTCAATCTGGCACATCAAATCCAGGTTTCAAGTCCACATTCCGAGGCTGTGTTCGCAAACTCATACCCTCCATCTGCATGCACTTTCAGGGACGATGTTCTTCCTTTCATGAAGCCCCTTCTGCAATTCTTCTCACAAATTGGCACTCCTTTCTACATCAATGCATACCCCTTCTTGGCCTACAAGAATGACCCTCAACACATCGACATAAACTACGCTCTCTTCAAGAAAAATCCAGGGATTTACGACGCCAAGACCAAACTGCACTACGACAACATGTTCATGGCTCAAATCGATGCTGCTTATGCAGCCTTGGAGAAGGTTGGGTTTGAGAAAATGGAGGTCATTGTTTCGGAAACTGGTTGGGCCTCTCGTGGTGACGACAATGAAGCTGGTGCAACGGTGAAAAATGCAAAGACTTATAACAAAAACTTGAAGAAGCTGTTGATGAAGAAAAAGGGTACCCCTTATAGGCCTAAGATGGTTGTGAGAGCTTATATTTTTGCCTTGTTTAACGAGAATTTGAAGCCTGGTCCAACTTCTGAGAGAAACTTTGGATTGTTCAAACCAGATGGTAGCATTGCTTATGATATAGGTTTCACAGGACTCACTTCATCAGCAACCTCGTCCTTTGTTTCCTTCAAGGGTGTTGGATCTTTATATGTAATGGTTTCTGCAAGTTGTGCGGCTTTTCTTCTTCTTGTAGCGTTATAA 1167 0.4336 MFSHSSSFFLCLLFFSVTLSHVLGDKVFTGTYGVNYGRIADNLPSPQSVVTLLKAAKIRNIRIYDADHQVLSAFKGSGIGIIIGLPNEFLRDISQGEDRAMNWIKENVQPFLPGTRIRGIAVGNEILGGGDMELWQVLLPAAKNVYTVLARLNLAHQIQVSSPHSEAVFANSYPPSACTFRDDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFMAQIDAAYAALEKVGFEKMEVIVSETGWASRGDDNEAGATVKNAKTYNKNLKKLLMKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLTSSATSSFVSFKGVGSLYVMVSASCAAFLLLVAL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02746 388 FunFam Glucan endo-1,3-beta-glucosidase 14 30 357 - -
Viun10g02746 388 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
Viun10g02746 388 Gene3D Glycosidases 31 356 - -
Viun10g02746 388 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 361 IPR044965 GO:0004553|GO:0005975
Viun10g02746 388 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02746 Viun-Chr10 40520828 40522414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02746 28 362 Glycoside Hydrolase AT3G15800 76.190 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02746 - - vra:106773873 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02746 10 40520828 40522414 Viun10g02746 10 40520828 40522414 ECH
Viun5g04049 5 48037620 48040231 Viun10g02746 10 40520828 40522414 PCT