Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04019 ATGGAAGGCATAACAGAGGGAGTGAACAACATCAACATCACCGATTCCTACAAGAAGAATCGGATTCAGGTCTCTAACACCAAGAAGCCCCTCTTCTTCTACGTTAATCTCGCCAAGAGATACATGCAACAGCATAACGAGGTGGAACTTTCAGCACTGGGAATGGCTATTGCCACAGTGGTAACTGTTGCTGAAATTTTGAAAAACAACGGACTTGCTGTGGAGAAGAAAATCACGACATCAACTGTTGACATAAAGGACGATTCTAGAGGCAGACCCGTTCAAAAGGCCAAGATTGAAATAGTACTTGGGAAAACAGCAAACTTCGATGAATTGATGGCTGCTGCTGCTGCTGAAGACGGTGAAAACGGAGAAGCTGAAGAGCAAAACGCATAA 396 0.4419 MEGITEGVNNINITDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELMAAAAAEDGENGEAEEQNA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04019 131 Pfam Alba 20 82 IPR002775 GO:0003676
Viun5g04019 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Viun5g04019 131 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Viun5g04019 131 Gene3D - 18 130 IPR036882 GO:0003676
Viun5g04019 131 FunFam Uncharacterized protein At2g34160 18 130 - -
Viun5g04019 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 123 IPR014560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04019 Viun-Chr5 47924979 47927564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04019 - - lang:109351177 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04019 5 47924979 47927564 Viun5g04019 5 47924979 47927564 ECH
Viun5g04019 5 47924979 47927564 Viun10g02730 10 40443187 40445313 PCT