Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02730 ATGTCACAACAACAGCAAACAATGGAAGCAATCACTGAGGGAGTGAACAACATCAATATCACTGAAACGTATAAGAAGAATCGTATCCAGGTCTCAAATACCAAAAAGCCTCTATTCTTTTACGTCAATCTCGCCAAGAGATACATGCAACAGCATAACGAGGTCGAGCTCTCAGCTCTGGGAATGGCTATTGCTACAGTGGTTACTGTTGCTGAAATCTTGAAAAACAATGGGCTTGCTGTTGAAAAGAAAATCATGACATCAACCGTTGACATAAAAGATGATTCCAGAGGAAGACCCGTCCAGAAGGCCAAGATTGAAATATTGCTGGGGAAGACTGCAAACTTCGATGAGTTGATGGCTGCAGCGGCTGCTGAAGATGGTGAAAATGGAGATGCTGAAGAACACACTACTTAG 417 0.4269 MSQQQQTMEAITEGVNNINITETYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAEDGENGDAEEHTT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02730 138 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 8 129 IPR014560 -
Viun10g02730 138 PIRSF UCP030333_Alba 4 138 IPR014560 -
Viun10g02730 138 SUPERFAMILY AlbA-like 26 121 IPR036882 GO:0003676
Viun10g02730 138 Pfam Alba 27 82 IPR002775 GO:0003676
Viun10g02730 138 Gene3D - 25 136 IPR036882 GO:0003676
Viun10g02730 138 FunFam Uncharacterized protein At2g34160 25 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02730 Viun-Chr10 40443187 40445313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02730 - - lang:109351177 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02730 10 40443187 40445313 Viun10g02730 10 40443187 40445313 ECH
Viun5g04019 5 47924979 47927564 Viun10g02730 10 40443187 40445313 PCT