Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03843 ATGTATAGAGCTGCATCTTCACGTCTCACCCTTCTCAAGGGAAATGGGAGAACCGCGGGAGACTCTAGATTTGCCTCGCGAGGTGTATTCAGCTGGCTTGGTGAGGGATCTTCCGGTTCTCTTCCTCCTCTGCACACCCCACTTAGAGGGTTTCCCCCTCCATCTTCACTGCCAGATTATGTTGAACCAGGAAAGACCAAGATCACAACTCTCTCCAATGGTCTAAAAATAGCATCAGAAACCTCACCAAACCCTGCTGCCTCAGTAGGGTTATATGTTGACTGTGGTTCCCTCTATGAGTCGCCATTGTCAAGCGGGGCATCGCACCTGCTAGAGAAAATGGCTTTCAAGAGCACGACAAACCGAAGCCACTTTCGTGTTGTAAGGGAAGTGGAAGCAGTGGGTGGTAATGTAGGAGCCACAGCCTCTCGGGAGCAAATGGGCTACACTTTTGATGCTCTGAGAACCTATGTCCCACAAATGATTGAATTGCTGGTTGACTCTGTAAGGAATCCGGCCTTCTTGGATTGGGAGGTCAACGAAGAGCTTCGAAAGGTGAAAGAAGAGATAGGAGATATAGCAATCAATCCACAGCGCCTACTTATGGAGGCAGTTCACTCTGCTGGTTATTCTGGAGCATTGGCTATGCCACTTTTTGCTACTGAAACAGCACTGAACAGATTAAATGGCCCCATTTTAGAGGAATTTGTTGCCGAGAATTATACTGCACCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATGAAGAACTTCTATCCGTTGCTGAACCACTTCTCTCTGATCTACCAAGTGTTCCGCGTTCTGAAGAACCAAGTTCTACATATGTTGGGGGTGATTTTCGTCAACAACGTGAATCAGGGGTTGCACATGTAGCTATTGCCTTTGAAGTGCCTGGTGGCTGGAAACAAGAGAAAGAAGCTGTTCTTTTGACCGTTCTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCTGGGGGACCTGGAAAGGGAATGCACTCAAGGCTTTATCTTCGTGTCTTGAATGAATATCAACAGATTCACTGTTTTTCTGCATTCAACAGTCTCTTCAACAATACAGGGTTATTTGGCATATATGCAACCACAAGCTCTGATTTTGTGGAAAAAGCTGTGGACCTAGCAGCCAGAGAATTAATAGCACTCGCATCACAAGGACAAGTTTCACAGGTACAACTTGACCGTGCCAAGGAATCCACGAAGTCTGCAGTATTAATGAATTTAGAGTCCAGAATGATTGCATCAGAGGACATAGGAAGACAGATATTGACTTACGGAGAAAGGAAGCCAATAGAGCAGTTCTTAAAGGAAGTAGATTCAATCACTTTGAATGATATCTCTAAATTTTCTCAGAAGATTATTTCCTCACCTCTCACTATGGCATCCTGTGGGGATGTTATGAATGTCCCAAGTTATGAATCCGTTAGCAGCAAGTTCCACGCAAAATGA 1488 0.455 MYRAASSRLTLLKGNGRTAGDSRFASRGVFSWLGEGSSGSLPPLHTPLRGFPPPSSLPDYVEPGKTKITTLSNGLKIASETSPNPAASVGLYVDCGSLYESPLSSGASHLLEKMAFKSTTNRSHFRVVREVEAVGGNVGATASREQMGYTFDALRTYVPQMIELLVDSVRNPAFLDWEVNEELRKVKEEIGDIAINPQRLLMEAVHSAGYSGALAMPLFATETALNRLNGPILEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPSVPRSEEPSSTYVGGDFRQQRESGVAHVAIAFEVPGGWKQEKEAVLLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIHCFSAFNSLFNNTGLFGIYATTSSDFVEKAVDLAARELIALASQGQVSQVQLDRAKESTKSAVLMNLESRMIASEDIGRQILTYGERKPIEQFLKEVDSITLNDISKFSQKIISSPLTMASCGDVMNVPSYESVSSKFHAK 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03843 495 PANTHER METALLOPROTEASE 59 483 - -
Viun5g03843 495 Pfam Peptidase M16 inactive domain 233 411 IPR007863 -
Viun5g03843 495 ProSitePatterns Insulinase family, zinc-binding region signature. 96 119 IPR001431 GO:0004222|GO:0006508
Viun5g03843 495 Pfam Insulinase (Peptidase family M16) 77 221 IPR011765 -
Viun5g03843 495 FunFam Mitochondrial-processing peptidase subunit beta 56 271 - -
Viun5g03843 495 Gene3D - 280 492 - -
Viun5g03843 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 64 273 IPR011249 GO:0046872
Viun5g03843 495 FunFam mitochondrial-processing peptidase subunit alpha 280 488 - -
Viun5g03843 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 283 486 IPR011249 GO:0046872
Viun5g03843 495 Gene3D - 58 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03843 Viun-Chr5 46890401 46894860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03843 K01412 - gmx:100810996 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03843 5 46890401 46894860 Viun5g03843 5 46890401 46894860 ECH
Viun5g03843 5 46890401 46894860 Viun10g02596 10 39627025 39632384 PCT