Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02596 ATGTACAGAGCAGCAGCTTCTTCATTCAGAAGCCATCTCAAGGGCCATGGATGCAAGTTGGGATCCACTAGGTCTTCCACATCAGCCGCTGTAGTTGCAAGGACTACCCAGGGTGGTTTGTTTAGCTGGCTTACTGGGGAGCGTTCTAGTTCTCTTCCTTCTCTGGATATACCCCTCGGTGGTGTTGTTCTCCCAGATCCACTCCCAGATTCTGTTGAACAAAGCAAGACCAAGATCACAACTCTTTCCAATGGACTTAAAATAGCATCAGAGACCTCGCCTAACCCTGCTGCTTCAATCGGGTTATATCTTGACTGTGGTTCCATCTATGAGACACCATTCTCAAGTGGAGCTTCACACTTGCTGGAGCGAATGGCTTTCAAAAGCACAACAAACCGTAGTCACTTTCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGTAACATAGGAGCCTCTGCCTCACGGGAGCAAATGGGATATACATTTGACGCCTTGAAAACCTATGTTCCACAAATGGTGGAACTATTGGTTGACTGTGTAAGGAACCCTGCATTCTTGGACTGGGAGGTCAATGAAGAGCTTCGGAAGGTGAAAGCAGAGCTTGGAGAACTGTCCAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTCCTGGCTCCTGAAGCAGCATTGAACAGATTGGACGGCCCCAGTTTGGAGGAATTTGTTGCTGAGAATTACACTGCACCTAGAATGGTACTTGCAGCAGCTGGGGTTGAGCATGAAGAACTTGTATCTATTGCTGAGCCACTTCTCTCTGATCTACCAAATGTCCCCCGTCCCGATGAACCTAAATCTGTCTATGTTGGAGGTGATTTTCGCCGTCATGGTGAATCAGGGGGTACACATGTTGCTCTTGCTTTTGAAGTTCCAGGTGGATGGCACAAAGAGAAAGATGCTATAGTTTTGACTGTTTTACAGATGCTTATGGGAGGCGGTGGGTCTTTTTCAGCAGGGGGCCCTGGAAAAGGGATGCACTCAAGGCTATATCTTCGTGTGCTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGCATCTTCAATAATACAGGATTGTTTGGCATTTATGCAAGCACTAGCCCTGATTTTGCGCCAAAGGCTGTGGATATAGCAGCCAAAGAACTAATAGCAATTGCTTCCCCTGGACAAGTTACACAGGTGCAGCTTGACCGAGCCAAAAAATCCACAAAGTCTGCAGTTCTAATGAACCTGGAATCTAGAATGATTGCATCGGAGGATATTGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCTTTGGAACAGTTCCTGAAGGCTGTAGATGAAATCACGTTGAACGATATCACCAAAATTTCTCAGAAGATTATTTCCTCACCTTTGACCATGGCATCATATGGGGATGTCCTCAGTGTGCCCAGTTATGAATCTGTAAACAGCAAGTTCCATGCAAAATGA 1521 0.4576 MYRAAASSFRSHLKGHGCKLGSTRSSTSAAVVARTTQGGLFSWLTGERSSSLPSLDIPLGGVVLPDPLPDSVEQSKTKITTLSNGLKIASETSPNPAASIGLYLDCGSIYETPFSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPEAALNRLDGPSLEEFVAENYTAPRMVLAAAGVEHEELVSIAEPLLSDLPNVPRPDEPKSVYVGGDFRRHGESGGTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFAPKAVDIAAKELIAIASPGQVTQVQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKAVDEITLNDITKISQKIISSPLTMASYGDVLSVPSYESVNSKFHAK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02596 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Viun10g02596 506 FunFam Mitochondrial-processing peptidase subunit beta 67 282 - -
Viun10g02596 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Viun10g02596 506 PANTHER METALLOPROTEASE 70 494 - -
Viun10g02596 506 Gene3D - 291 502 - -
Viun10g02596 506 Gene3D - 67 279 - -
Viun10g02596 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Viun10g02596 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Viun10g02596 506 FunFam mitochondrial-processing peptidase subunit alpha 291 499 - -
Viun10g02596 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 304 497 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02596 Viun-Chr10 39627025 39632384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02596 K01412 - gmx:100794691 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02596 10 39627025 39632384 Viun10g02596 10 39627025 39632384 ECH
Viun5g03843 5 46890401 46894860 Viun10g02596 10 39627025 39632384 PCT