Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03836 ATGCGATATTTGTCTCTCTTCAAGGCTCAAAGAGAAATTAGATTAATTGTGAGGATGATGATGATCGGACAGGAAAAGGGTGTGAAGCCTGTTCTGCTTAAATTTGGTTTGGCTCTGGCTCTTTCGTTTGCTGGATTTCTCTACTCACGCTTCAGAATCAGAAGAATCAAGCCCTCTAAATCACGCAAGGGGGGTTCTTTCGGTCACGAGAGTGAGGTTAATTCAGGAGGAGGTATAGGGGCAGCATTAAGTACTTGCAACACCGTCTCAGCAGGAAATTTTCTATGTTCTGAAGAAACTTGCACCAACAGGGTGATAACTGGCAATTCTCCTCTTGCTCTCTCTCGTGACAGTACACAAAATGGTGATAGAGATGAGTTCCTCCTTCCTGAATTTAATGATCTTCTTAAGGTCGTAGACTTTGGAGCCTCAGTTGTCAGAAATTCTTCTAAAAGAAATATGGAAGCACCATGGTTAAAAGAATATGCAGATCCCGAGAAGGATGACTACGAGCAAGAGGTAATTGAACTCCGGAACATGATTAGAATGCTTCAAGACAGGGAACAAAGTCTTGAGGTTCAACTGCTCGAGTACTGTGGTCTTAGAGAGCAAGAAACAGCAGTGATGGAGCTCCAGAATAGATTGAAAGCAAGTACTGTAGAGGTAAAGATGTTCAATCTGAAGGTTAAGACCTTACAGTCTGAGAATTTGAGACTAAAGGAACAGGTCTCGGATCATACAAAAGTGCTGGCTGAACTTGAGAGTGCAAAAGCGCAAGTAAAATTGCTTAATGAGAAAATTAGGTGTGAAGTTGAACAGAACAGGGAGCAGATCATGAGTCTTCAACAAAAAGTTTCCAGGTTGCAAGACCAACAATGCAAAGATGCTGCTGCTTGTGATCAGGACATTCAAATAAAGCTGCAAAAGCTAAAGGAGCTCGAGTCTGAAGCAGAAGAGTTGAGGAAGTCTAATTTAAGATTGCATATAGAAAATTCTCACTTAGTTCGAAGATTAGATTCTACCCAAATCCTTGCTAATGCAGTTCTGGAAGACCCAGAGGTGGATGCTGTGAAGCAAGAAAGTGAGTGTCTTAAACAAGAAAATGAGCACTTGAAGAAGGAAATTGAGCAACTATATTCTGATCGATGTTCAGATCTTGAAGAATTAGTATATATGCGGTGGATAAATGCTTGCTTACGATATGAACTAAGAAACTATGAAGCCCCACCAGGTAAAACGGTTGCAAAGGACTTAAGCAGAAGCCTGAGCCCCACGTCTGAGAGGAAAGCCAAGCAGCTTATACTTGAATATGCAAATGCTGATGCACCAGGGAACATTGTGGACTTTGATATAGATCAATGGTCCTCCTCGCAGGCTTCTTCTCTCACTGACATTGGAGAGTGTGATGATTTTTCTTCTGTAGATAATTCATCTGCAGCCAAAACTAACACCATAAGCCAGACCAAGCTTTTAAGCAAGCTTAGACAACTGATACAAGGTAAAGACAGTGGTCATCACCATAGTCATGTTTCATCACAAGAAAAAATCAGACGTCAAAATAGCAATCTTCAACAGCAAAGTACTTCAACTGGAATTGAGGGTCTTAGGAGTGAGTTTTCAACTCCCATTGCCACATCTAGAACTTCCCTTGATTTCTCTAGGTTGACATGTACTCAGGAAGAAGTAAATAGGAGAAATTCAGATAGCGCTTTCATGGAAAGCTCAAAGAACTTCAGTGCACGTAAAAGTAGTTCCTTCTCAGATTCCTTAGGCTTGGAAAAAAATAATTTGGAGAAATACGCAGAAGCTTTAAAAGATTCTAGCGTGAGTGCTAGACAACAAAGACGTAGTAGATCAGCATCATGTAGTTAG 1872 0.4092 MRYLSLFKAQREIRLIVRMMMIGQEKGVKPVLLKFGLALALSFAGFLYSRFRIRRIKPSKSRKGGSFGHESEVNSGGGIGAALSTCNTVSAGNFLCSEETCTNRVITGNSPLALSRDSTQNGDRDEFLLPEFNDLLKVVDFGASVVRNSSKRNMEAPWLKEYADPEKDDYEQEVIELRNMIRMLQDREQSLEVQLLEYCGLREQETAVMELQNRLKASTVEVKMFNLKVKTLQSENLRLKEQVSDHTKVLAELESAKAQVKLLNEKIRCEVEQNREQIMSLQQKVSRLQDQQCKDAAACDQDIQIKLQKLKELESEAEELRKSNLRLHIENSHLVRRLDSTQILANAVLEDPEVDAVKQESECLKQENEHLKKEIEQLYSDRCSDLEELVYMRWINACLRYELRNYEAPPGKTVAKDLSRSLSPTSERKAKQLILEYANADAPGNIVDFDIDQWSSSQASSLTDIGECDDFSSVDNSSAAKTNTISQTKLLSKLRQLIQGKDSGHHHSHVSSQEKIRRQNSNLQQQSTSTGIEGLRSEFSTPIATSRTSLDFSRLTCTQEEVNRRNSDSAFMESSKNFSARKSSSFSDSLGLEKNNLEKYAEALKDSSVSARQQRRSRSASCS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03836 623 Coils Coil 167 194 - -
Viun5g03836 623 Coils Coil 354 381 - -
Viun5g03836 623 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 29 519 IPR040265 -
Viun5g03836 623 MobiDBLite consensus disorder prediction 501 540 - -
Viun5g03836 623 MobiDBLite consensus disorder prediction 604 623 - -
Viun5g03836 623 Coils Coil 296 330 - -
Viun5g03836 623 MobiDBLite consensus disorder prediction 607 623 - -
Viun5g03836 623 MobiDBLite consensus disorder prediction 515 540 - -
Viun5g03836 623 Coils Coil 201 291 - -
Viun5g03836 623 MobiDBLite consensus disorder prediction 563 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03836 Viun-Chr5 46867320 46870632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03836 - - gmx:100796238 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03836 5 46867320 46870632 Viun5g03836 5 46867320 46870632 ECH
Viun5g03836 5 46867320 46870632 Viun10g02593 10 39609376 39612830 PCT