Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02593 ATGATGACGGAAAGAATAATTAGGTTTTTTGGTTTCATAACGAAAGAGGAAAAGGGTATGAAGCCTTTTCTTCTGAAATGTGGTTTGGCTTTGGCTCTTACCTTTGCTGGAATTCTCTACTCTCAAATCGGAGTCAAGAGAATCAAACCTTCCCCTACTTCCCCCAAGGGGCACCCTTCAGGTCATGGAAGCGAAGATAATTTTGTAAGAGGTAAAAGGGCGTCTTCTTCTAGTTCTCGCAACAATCTTGCAGAGGAAAATGTTTTGGATGCTGAAGAAACATGCAGTAGCAAGGTGATTGGTAAAAATTCCCCATCAGGTCTCTCTCCGAGGACTAAAAAAAGTGGAGAGAAAGATGAGTTCATCGGTTCTGAATTTAATGATCCTATCAAGGATCCAGAATTTGAAGTCATCGTTGAAGGTAAGAAAGAGGTAGAAACACCAAGGTCAAAAGTAGGATCTCCTATGGCATATGCAAATGTTGACAAAGATGATTATGAGAAAGAGATCAGGAACCTCAGGAGCATGATCAGAATGCTTCAAGAGAGGGAAAGAAACCTTCAGTTTCAACTGCTTGAGTACTGTGGAATTAAAGAGCAACAAGCAGCAGTGATGGAGCTCCAAAATAGATTGAAGATAAGTAATATGGAGGCTAAGATGTTCAATCTCAAGGTTGTGACCTTGCAGTCCGAAAATCATAGATTAGAGGTACAAGTGGCTGATCATGCAAAACTTTTGTCTGAGTTAGAGACTGCAAAAACCAAAGTTAAGTTTTTGAAGAAGAAAATTAAGTACGAAGCTGAACAGAACAGGGAGCATATCATGAATCTTAAGCAAAAAGTTGCCAAGTTGCAGGATCATGAATTTAAAGTTGCTGCTAACGAACAAGAGATTCAGATTAAGCTGAAAAGGCTTAAGGATCTTGAGTGTGAGATAGAACAGTTGAGAAAATCTAATTTGAGACTGCAGATGGAAAATTCTGACTTATCTCGAAGATTGGATTCTACTCAGCTCCTTGCAAATGCTGTTCTAGAAGATCCTGAGGCACAAGCTCTGAAGGAAGAAGGTGAACGTCTCAGACAAGATAATGAAGGGTTGACAAAAGAACTTGAGCAATTACATGCAGATAGATGTTCAGATCTTGAAGAGTTAGTTTATTTGCGGTGGATAAATGCTTGCTTGAGACATGAACTACGAAGTTATCAGCCACCATCTGGTAAAACAGCAGCAAGGGACTTGAGTAAAAGCTTGAGTCCAACCTCTGAGAAGAAAGCCAAGCAACTTATACTTGAATATGCAAACAATGAAGGGCGAGGGAGCGTTTCTGATATGGACTCTGACCAATGGTCCTCTTCACAGGCTTCTTGTTTCACAGACTCTGGAGAGCATGAGGATTATTCTCTTAATGATACTTCATCTGAGGTCAAAGCTAACAATCCAAGCAAATCAAAGATTTTTGGCAAGCTTATGAAGCTGATACGAGGCAAAGATAGCCAGCAGAACCAACGTGGTCGAGTTATATCTAAAGAAAAATCAATTTCCCAAGTAGATAGCAGTTCACATTTCAGCTTGAGTATGTCAACCGGAAATGAGTGTCTTAGGAGCGAGTATACCACTCCCTCTGGCACTTCTAGAACTTCCTTTGATTATAACCAAGCCACGAGTATGAAGGATGATAGTGGCAGAAATTCAGATAGCCATACCCCAGGAAGCTCCAAGAATTTCAGTCCAATGAGAAGAAGTTCAGCAGATTCCAAAAACCGCCTTGATTCTTTCTCAGAATCCTCTGCCATGGAGAAAACTAATTTGGTCAAATATGCTGAAGCTTTGAAAAATTCAAGTGAAGCTCCCAAACATAAATCACACAGAAGATCAGCAGCATATAGTTCGTTTTAA 1896 0.4014 MMTERIIRFFGFITKEEKGMKPFLLKCGLALALTFAGILYSQIGVKRIKPSPTSPKGHPSGHGSEDNFVRGKRASSSSSRNNLAEENVLDAEETCSSKVIGKNSPSGLSPRTKKSGEKDEFIGSEFNDPIKDPEFEVIVEGKKEVETPRSKVGSPMAYANVDKDDYEKEIRNLRSMIRMLQERERNLQFQLLEYCGIKEQQAAVMELQNRLKISNMEAKMFNLKVVTLQSENHRLEVQVADHAKLLSELETAKTKVKFLKKKIKYEAEQNREHIMNLKQKVAKLQDHEFKVAANEQEIQIKLKRLKDLECEIEQLRKSNLRLQMENSDLSRRLDSTQLLANAVLEDPEAQALKEEGERLRQDNEGLTKELEQLHADRCSDLEELVYLRWINACLRHELRSYQPPSGKTAARDLSKSLSPTSEKKAKQLILEYANNEGRGSVSDMDSDQWSSSQASCFTDSGEHEDYSLNDTSSEVKANNPSKSKIFGKLMKLIRGKDSQQNQRGRVISKEKSISQVDSSSHFSLSMSTGNECLRSEYTTPSGTSRTSFDYNQATSMKDDSGRNSDSHTPGSSKNFSPMRRSSADSKNRLDSFSESSAMEKTNLVKYAEALKNSSEAPKHKSHRRSAAYSSF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02593 631 MobiDBLite consensus disorder prediction 436 480 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 97 111 - -
Viun10g02593 631 Coils Coil 242 262 - -
Viun10g02593 631 Coils Coil 267 287 - -
Viun10g02593 631 Coils Coil 349 376 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 495 600 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 439 462 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 112 127 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 493 631 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 407 422 - -
Viun10g02593 631 Coils Coil 163 190 - -
Viun10g02593 631 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 21 514 IPR040265 -
Viun10g02593 631 MobiDBLite consensus disorder prediction 401 422 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 50 127 - -
Viun10g02593 631 MobiDBLite consensus disorder prediction 70 85 - -
Viun10g02593 631 Coils Coil 197 217 - -
Viun10g02593 631 Coils Coil 291 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02593 Viun-Chr10 39609376 39612830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02593 - - gmx:100781632 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02593 10 39609376 39612830 Viun10g02593 10 39609376 39612830 ECH
Viun5g03836 5 46867320 46870632 Viun10g02593 10 39609376 39612830 PCT