Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03785 ATGACAGACAGAGTGTACCCTTCGGCAAAGCCCGCCGCAGCCGCCACTGCCAACCCCGCTTTCCCGGCGACGAAAGCACAACTCTACGGTGCCACCCGCCCCACCTACCGCCCGCAGCCTCACCACCGGCGGCGGAGCAAGCGCCGGTGCTGCTGCACCTTCTTCTTCTGGCTGATCCTCACCGTGCTCGTCCTACTCCTCCTGATCGGCATCGCCGGCACTGCGTTCTACCTGCTCTACCGCCCCCACCGCCCTACCTTCACCGTGACCTCGCTGAAACTCTCGTACCTGAACCTCACCGCCTCCTCCACCCTTAACTCCCGCTTCGACGTCACAGTCTCCGCCACCAATCCCAACAAGAAGATCCTCTTCGCCTACGACCCCACCTCCATCGCTATACTCTCCGGCGACGTCGACGTCGGCGATGGCACCGTCCCCGCCTTCCTGCACGGCAAGAAGAACACCACGCTCATCAAAACCTCCATTGTGAGCACCGGCAGCGCGCTCCAGAGCGACGACGCGTCGCGGTTGAAGTCCAGCATGAAGAACAAGAACGGGCTGCCACTGACGGTGAATTTGGAAACGAAAGTGAAGGCGAAAACGGGAAAATTGAAAACCCCGAAGGTCGGAATCAGAGTCTCCTGCGACGGAATCAGAGTGAATCTTCCCTCCGGCAAGAAACCGGCGACGGCGTCCACTTCGCACGCCAAGTGCAACGTGGATGTTAGGTTCAAGATCTGGAAGTGGACGATTTGA 756 0.6019 MTDRVYPSAKPAAAATANPAFPATKAQLYGATRPTYRPQPHHRRRSKRRCCCTFFFWLILTVLVLLLLIGIAGTAFYLLYRPHRPTFTVTSLKLSYLNLTASSTLNSRFDVTVSATNPNKKILFAYDPTSIAILSGDVDVGDGTVPAFLHGKKNTTLIKTSIVSTGSALQSDDASRLKSSMKNKNGLPLTVNLETKVKAKTGKLKTPKVGIRVSCDGIRVNLPSGKKPATASTSHAKCNVDVRFKIWKWTI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03785 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 12 227 - -
Viun5g03785 251 SUPERFAMILY LEA14-like 67 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03785 Viun-Chr5 46543967 46545325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03785 25 215 EF-hand Containing Proteins AT5G21130 27.835 5.41e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03785 - - gmx:100819194 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03785 5 46543967 46545325 Viun10g02526 10 39176657 39177590 PCT