Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02526 ATGACTGATAGGGTTCATCCTTCAGCCAAAACCACCGCCAACGTTGGCCCCAAGCCAACATTCCCGGCCACAAAATCCCAACTTTCCGGCGCCAACCGCCCCACCTACCGCCCCCAACCACCCCGCCGCAGCCGCCGCCGCGGCTGCGCCTCCACCCTCTGCTGCTACCTGTTCATGATCCTCCTGCTCCTCCTCCTTCTCATCGGCGGCGCCGGAACCGTCTTCTACTTCCTCTACCACCCACAACGCCCCTCGTTCTCCGTCACCTCCCTCAAACTCTCCTACTTCAACCTCACCTCTCCCTCCACCTTCAAGGCCAAGTTCGACCTCACCCTCTCGACTACCAACCCCAACGACAAGATCCTCTTCTCCTACGACCCCACCTCCGTTTCCCTCCTTTATGACGACGCCACGGTCGCCACCGCCACCATCCCCTCCTTCCTCCACCACCAGAAGAACACCACCGTTCTCGAGGCCTACGTCACGAGCACCGAGGAAGAGGTGCAGAGCGACACCGTGGCCGAACTGAAGAGGAGCACGAAGGGCAAGAGCGAGGTTGCGCTAAAGGTGAAGTTGGAGACGAAGGTGGAGGCCCAGATGGGTGTACTCCAAACCCCGGCCGTCGGAATCACCGTTGTGTGCGACGGCATCGCCGTGTCCCTCTCCGACGGTGAAAAACCGGCGTCGGCCTCGGTAGAGAATACGGCGTGCGAAGTGGATGTGAGGTTCAAAGTCTGGAAATGGACTGTAGGATGA 756 0.6045 MTDRVHPSAKTTANVGPKPTFPATKSQLSGANRPTYRPQPPRRSRRRGCASTLCCYLFMILLLLLLLIGGAGTVFYFLYHPQRPSFSVTSLKLSYFNLTSPSTFKAKFDLTLSTTNPNDKILFSYDPTSVSLLYDDATVATATIPSFLHHQKNTTVLEAYVTSTEEEVQSDTVAELKRSTKGKSEVALKVKLETKVEAQMGVLQTPAVGITVVCDGIAVSLSDGEKPASASVENTACEVDVRFKVWKWTVG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02526 251 MobiDBLite consensus disorder prediction 1 34 - -
Viun10g02526 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 223 - -
Viun10g02526 251 Gene3D - 77 209 - -
Viun10g02526 251 Pfam Late embryogenesis abundant protein 111 214 IPR004864 -
Viun10g02526 251 MobiDBLite consensus disorder prediction 1 46 - -
Viun10g02526 251 SUPERFAMILY LEA14-like 62 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02526 Viun-Chr10 39176657 39177590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02526 36 238 EF-hand Containing Proteins AT5G21130 26.168 2.63e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02526 - - gmx:102669753 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02526 10 39176657 39177590 Viun10g02526 10 39176657 39177590 ECH
Viun5g03785 5 46543967 46545325 Viun10g02526 10 39176657 39177590 PCT