Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03588 ATGCCTGAACGTACCTACAAACATATTGATATTGCAAGAAGTCCTACCAGCAGCATCGCTAGCGTGGAACATTTCCTCCGAAGTGCAGGAGGGGATTCTTCTAGGATGTCACCAACCTGCTCTTCCCCTTCCTCTCCTATGAGGCCTCAGGACTCGGAAGACGACCAGGGCCTCTATCAGAAGAAATCAGTCCTCACCAAAGTGAAACAAAAGGCTAGGAAATTGTGTAACAGCCTCAGCAAGAAAAGAATAGAGGACGAGAATGTCACACCCTCTAATGGTGCTAGGTTTGTAGATGAAGAGGATGTTAGGTTTGCAGATGAAGAGGAGGAGGAGGAAGATGTTGAAGAAGAAGAAGAAAAAGAAGAAGATGCTGAATACCTTGGAGCTCCTATGTATGAATCAGCGCAGGCACCTGAGACATACAAAGAAAATGCAAGGCAACATCCAAGGGCAAATCCAGTAATCTCTGAGAAGCACGTTTTGAACAACGCTATCAAACTAGGAATGCAGGAAGATCAAGAAAAGACAAGTGCTGATGTCAATCCTAAATTCACTTCAATGACTCAACCTGATACTACAACAATAGCAGCATCTTCAACCAACGCTTCTGCAACCTTAGCTCAGAAAATGATACCTGCCTATGCTGAAGGGTCACTTGCAGCCAACAGCATCCCGTCCCAAAATTCATCTGTTTCATCATCTCGGCTGCAACATTCATTTTCCTCACCTGCTTCAAAGAGTAGGAAGAATACGAGCCAAAACGTTGCTCCAGTCAATGATTATTTGAAGAACACGTCTGGAAAAGAGTATGATGTCCAAATTGAGTCTCCAGAGCAAGATTTGTCATCTTCATCTGCTTCAAAGAGTGGGAATATTACACAGAAGACTTTTTCACTCAAAGATTCAATGAACAGGTCTGAACAAGGGAATGATGCCACAAATATGATTCCATTTCAAAAATCATCATCCTTCTCAGCTGCTTCAATGAGTGGGAAAAACACAAGCCAAAAGAGTGTTTCGGCCAAAGATTATTCAACGCGCAAGTCAAGGCTACGGGATGATGAAAAAACTACGTCTCACCTTCAGGTGACATCTGGAGAAAATGATCCAAGCAGAACTTCTAGTAATGCAGGCATGATGGACAAGGTGAGAGGAGCTGTAAATTCATTTCTCGGGAATGAGGAGCCATCAGAAGAATATGGAGTCAAAATTCCTACTACACGCACTTCATCACAAACTCAACAAGTTGTTGAGGATGAGAACCGTGGGAGAATTCTACAGACAAATTAA 1293 0.43 MPERTYKHIDIARSPTSSIASVEHFLRSAGGDSSRMSPTCSSPSSPMRPQDSEDDQGLYQKKSVLTKVKQKARKLCNSLSKKRIEDENVTPSNGARFVDEEDVRFADEEEEEEDVEEEEEKEEDAEYLGAPMYESAQAPETYKENARQHPRANPVISEKHVLNNAIKLGMQEDQEKTSADVNPKFTSMTQPDTTTIAASSTNASATLAQKMIPAYAEGSLAANSIPSQNSSVSSSRLQHSFSSPASKSRKNTSQNVAPVNDYLKNTSGKEYDVQIESPEQDLSSSSASKSGNITQKTFSLKDSMNRSEQGNDATNMIPFQKSSSFSAASMSGKNTSQKSVSAKDYSTRKSRLRDDEKTTSHLQVTSGENDPSRTSSNAGMMDKVRGAVNSFLGNEEPSEEYGVKIPTTRTSSQTQQVVEDENRGRILQTN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03588 430 MobiDBLite consensus disorder prediction 344 361 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 77 130 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 169 197 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 138 157 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 27 64 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 276 343 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 404 430 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 224 262 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 103 125 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 362 379 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 276 430 - -
Viun5g03588 430 MobiDBLite consensus disorder prediction 180 197 - -
Viun5g03588 430 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 31 429 IPR037491 GO:0009737
Viun5g03588 430 MobiDBLite consensus disorder prediction 32 51 - -
Viun5g03588 430 Coils Coil 98 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03588 Viun-Chr5 45393996 45396598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03588 - - vra:106758277 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03588 5 45393996 45396598 Viun11g02158 11 36639777 36641906 PCT