Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02158 ATGGCTCAACTCGAACGCCCCCAGAGACAGGTTGAAACTACTGCAAAAGCTCCCCCTGCCATCCACACCATGGAACAACTCCTCCGAGGGGAGTCATCCAAGTCTAACAAGCATTCACCAACCTACTCCTCTTCCCCCTCCTCCAACTTGTCTTCCCCCAGCTCCCCTTTCTTCCAAAGGTTGAGGTCTTCTCATGACGCAGAAGACGATCATTCCCAGAATCAGAAGAAATCAGTTCTCACCAAAGTCAAGGAGAAGGCCAAGAAACTTCGCCACAGCCTCAGCAAGAAAAAGCACGAGGATGGGAATCTCAGTAGTCCATCATCTGCTACTGGTGCAGAAGGTGATGGAGCAGAAGAGGAAGCTGAATTTCTCGGAGCTCCTATGTACGAATCAGAGAAGGCACCCGTAGGGTACAAAGCAAACGCGAAGCAGATTCCAAGTCCAAGAGCAAATCCTATGATCCCTGAGAAGCATGTTGTATCAAGCAGTGACAAACACGTAGTCGAACAAGATCATGAAAGGGCACTGTACCGTTCCTTATCCAAGAGAACAACACACCCACACCCTGCAACAACAATAACAACCACCACCCCACATGTTACCACTGCTTCTGTTACTAATATTAACGTTAATACTAATCCTAGTACTCATTCTGGTCTACACAAGAAAACCACCGAAACGATAGCACCTAAACTGTCAACAACAATTCAGACCGAAAAACCAGATGCTGCACATGTAACCTCCAAACTTCTAGGTCTCACTGTGTCCAAACCCTCAGAGCATCATGATCATCATCCTTCACCATCATCGTCATCATCACCAACAACATTTGCACCAAAAACAACTCGCAGCACTTTGTCGTTTTCCACTCCTCGTACTCCCCCTGCAAGAGTAGTAACTTCTCAGTACCCTACAACCACTCCGCGAACTACATCAGCTCCAATAACTTCAGCACCATCAGCTGGTATTTCACAGAGTGGGAAGAACACAAGCCCCACCGCGCAAATATGGGATAAGGGTGTGTCCATGAAAGAGTACTTGTTGAACAAACTGGAGCCGGGGGAAGATGAGAAGGCGCTGTCTCAGGTGATATCTGAAGCAATGAGTCCCCGGAGAACTCCCGGTGATGCAGGCGTGATGGAGAAGGTCAGAGAAGCTGTCACTTCTTTGCTCCGAACTGAGGAACCTGCAAAATATGCAGACGCATCTTCTGTTGCTACTCCAAGTACTACTCGCTTGTCACCTTCGAGCCCAGTATCCACCAACGCTTCTCGCGCTTCATCTCAAATGCCATCATCTTCCAATGCTTCTCGTGCTTCGTCTCAAATGACAGCATCTACCACTGTTTCTCGCACTTCATCACTAGTCCCTGTATCTTACAACGCCCAGCAAGACTTTACAGAGGCCCAGGAAGAAAACCATGGCCGAATTCTTCAGGCAAATTGA 1449 0.481 MAQLERPQRQVETTAKAPPAIHTMEQLLRGESSKSNKHSPTYSSSPSSNLSSPSSPFFQRLRSSHDAEDDHSQNQKKSVLTKVKEKAKKLRHSLSKKKHEDGNLSSPSSATGAEGDGAEEEAEFLGAPMYESEKAPVGYKANAKQIPSPRANPMIPEKHVVSSSDKHVVEQDHERALYRSLSKRTTHPHPATTITTTTPHVTTASVTNINVNTNPSTHSGLHKKTTETIAPKLSTTIQTEKPDAAHVTSKLLGLTVSKPSEHHDHHPSPSSSSSPTTFAPKTTRSTLSFSTPRTPPARVVTSQYPTTTPRTTSAPITSAPSAGISQSGKNTSPTAQIWDKGVSMKEYLLNKLEPGEDEKALSQVISEAMSPRRTPGDAGVMEKVREAVTSLLRTEEPAKYADASSVATPSTTRLSPSSPVSTNASRASSQMPSSSNASRASSQMTASTTVSRTSSLVPVSYNAQQDFTEAQEENHGRILQAN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02158 482 MobiDBLite consensus disorder prediction 257 334 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 141 200 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 269 334 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 160 181 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 28 61 - -
Viun11g02158 482 Coils Coil 80 100 - -
Viun11g02158 482 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 24 481 IPR037491 GO:0009737
Viun11g02158 482 MobiDBLite consensus disorder prediction 404 457 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 62 81 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 1 120 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 397 457 - -
Viun11g02158 482 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02158 Viun-Chr11 36639777 36641906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02158 - - var:108319604 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03588 5 45393996 45396598 Viun11g02158 11 36639777 36641906 PCT