Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03561 ATGGGTAGCCCTGAGAAGAATGACAACAAGGGCTTTTTCGCCACCATGACTTCCGGCTTCTCCATCTTCAGCAATGCTATGCACCGATCAGTAAACGGAGAGAATTGCCGTCCCATGTACTTGTTCGTAGTTCCTAGCTCTCATACCTGGACGTGGTACTGGAAAGACTTATCGAGTAGTGTTCCATCAAGGATCTGCAGTGCAGTGCAATTTTCAGCAGTTCTATATATCAATATATCAAGGATGGGAGCTACTAGTAATTTGTTGCTGGGGTATGAAGGGGTAGAAGTCATAAATCCGGAGGGTGGTAAAGAGGATGCAGAGGAGGAAGCCCAGAGAGGAAGATGGAAACCTGAGGAAAGAGACAGTTACTGGAAGATGATGCACAAATATATTGGCTCAGATGTGACATCAATGGTAACGCTACCTGTTATTATTTTTGAACCAATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATAAATGTGAGGACCCATACATGAGGATGGTGTATGCATCGTCATGGGCTATATCGGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTATGAGATGGTTAACCATGGTGGAGTTTCATTTCTTGCAGAACAGGTGAGTCACCATCCCCCGATGAGTGCTGGTCATGCTGAGAATGAACATTTTACATATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCCGTTGGAAGAACACGTGTAACCCTCAAGAAGGATGGTGTAGTCATAGATTTGATTCCCCCTCCAACCAAGGTTAATAATTTGATATTTGGACGAACATGGATTGATTCACCTGGGGAGATGATAATGACGAACTTGACAACAGGGGACAAAGTTGTACTCTACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTCTATAACTCGGCCGAGGAGCCTAAAATATTGATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCTTGTGATTTGGAAGGAGAGCCTCTCCCGGACACAGAATTGAAAGAGGTTTGGCATGTTGCAGATGTTCCAGCAAATGATCAATTCGACTATACATACTTTGCGCATAAAGTAAACAGCTTTGACACTGCTCCTAGAAAATTGTTGCCATCAGACTCCCGTTTACGACCGGATAGATTTGCACTTGAAATGGGTGATATATCCAAATCAGGGGCAGATAAAAGCAGTTTGGAAGAGAGGCAACGCGCCGAAAAGAAAATCCGAGAAGCCAAAGAGCATAAATTTACACCAAGATGGTTTGATTTGACTGAAGAGGTCACATCAACTCCATGGGGTGATTTGGAGATATACCAATACAATGGTAAATACACTGAGCATCGTACTGCTATTGATAACTCAGACACTATTGATCATGTTGATAATAAAGATATTGAATTTAATCCATGGCAGTATGGTGATTTGTCCAAAGAATGA 1536 0.4245 MGSPEKNDNKGFFATMTSGFSIFSNAMHRSVNGENCRPMYLFVVPSSHTWTWYWKDLSSSVPSRICSAVQFSAVLYINISRMGATSNLLLGYEGVEVINPEGGKEDAEEEAQRGRWKPEERDSYWKMMHKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADKCEDPYMRMVYASSWAISVYFAYQRTWKPFNPILGETYEMVNHGGVSFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKKDGVVIDLIPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPDTELKEVWHVADVPANDQFDYTYFAHKVNSFDTAPRKLLPSDSRLRPDRFALEMGDISKSGADKSSLEERQRAEKKIREAKEHKFTPRWFDLTEEVTSTPWGDLEIYQYNGKYTEHRTAIDNSDTIDHVDNKDIEFNPWQYGDLSKE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03561 511 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 112 481 IPR000648 GO:0008289
Viun5g03561 511 Gene3D - 205 377 - -
Viun5g03561 511 ProSitePatterns Oxysterol-binding protein family signature. 221 232 IPR018494 -
Viun5g03561 511 Gene3D - 414 504 - -
Viun5g03561 511 SUPERFAMILY Oxysterol-binding protein-like 117 493 IPR037239 -
Viun5g03561 511 FunFam Oxysterol-binding protein-related protein 3C 413 506 - -
Viun5g03561 511 Pfam Oxysterol-binding protein 123 481 IPR000648 GO:0008289
Viun5g03561 511 FunFam oxysterol-binding protein-related protein 3C 205 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03561 Viun-Chr5 45274338 45280508 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03561 - - vun:114183572 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03561 5 45274338 45280508 Viun5g03561 5 45274338 45280508 ECH
Viun5g03561 5 45274338 45280508 Viun11g02135 11 36520815 36525823 PCT