Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02135 ATGGGCAGCCCCTCGAAGAAGAATGAAAGTAAGGGGTTTTTCTCCGCCATGTCTTCCATCTTCACCAACGCTATGCACCGATCGGTCAACGGGCTTCTTGGATATGAAGGTGTGGAAGTCATTAATCCAGAGGGAGGTAAAGAAGATGCAGAGGAGGAAGCAGAGAGAGGAAGATGGAAACAAGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAAATATATTGGCTCGGATGTAACATCAATGGTGACACTACCAGTTATTATCTTTGAACCGATGACTATGCTTCAGAAAATGGCCGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATGAATCAGAGGATCCATACATGCGGTTAGTTTATGCAACATCATGGGCTATATCGGTGTACTTTGCTTACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGACTAATCACGGCGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTGAAAACTAAGTTTTTGGGAAATTCTGTTGACGTTTACCCTGTTGGAAGAACGCGTGTGACTCTTAAGAGAGATGGTGTAGTCTTGGATCTGGTGCCACCTCCTACAAAGGTTAACAACCTCATATTTGGCCGTACTTGGATTGATTCGCCTGGGGAAATGATAATGACTAATCTGACAACTGGAGACAAAGCTGTACTATATTTTCAACCATGTGGATGGTTCGGTGCCGGTCGATATGAAGTGGATGGATATATCTATAATTCTTCTGAGGAGCCTAAAATATTAATGACTGGGAAGTGGAACGAGTCAATGAGTTATCAACCCTGTGATTCAGAAGGAGAGCCTCTCCCAAACACAGAATTGAAAGAGGTTTGGCATGTAGCTGATGTTCCAAAGAATGACAAATTTCAGTATACATATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAGTTGTTGGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTTTCAAAATCCGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAACCCGAGAAGAAAAAGGCCATAAGTTCACGCCTAGATGGTTTGATTTAACTGAAGAAGTGACAGCAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGGTAAATACATTGAACATCGGGCAGCTGCAGATAACTCGGGAGGCATTGATGATTGTGATGTCAAATCAATTGAATTCAATCCATGGCAGTTTGGTAATTTGGCCGCGGAATGA 1365 0.4286 MGSPSKKNESKGFFSAMSSIFTNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAERGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADESEDPYMRLVYATSWAISVYFAYQRTWKPFNPILGETYEMTNHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHVADVPKNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEERQRAEKRTREEKGHKFTPRWFDLTEEVTATPWGDLEIYQYNGKYIEHRAAADNSGGIDDCDVKSIEFNPWQFGNLAAE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02135 454 Gene3D - 148 325 - -
Viun11g02135 454 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 55 424 IPR000648 GO:0008289
Viun11g02135 454 FunFam oxysterol-binding protein-related protein 3C 148 325 - -
Viun11g02135 454 ProSitePatterns Oxysterol-binding protein family signature. 164 175 IPR018494 -
Viun11g02135 454 FunFam Oxysterol-binding protein-related protein 3C 356 449 - -
Viun11g02135 454 Pfam Oxysterol-binding protein 67 424 IPR000648 GO:0008289
Viun11g02135 454 MobiDBLite consensus disorder prediction 366 387 - -
Viun11g02135 454 Gene3D - 356 439 - -
Viun11g02135 454 MobiDBLite consensus disorder prediction 369 387 - -
Viun11g02135 454 SUPERFAMILY Oxysterol-binding protein-like 61 431 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02135 Viun-Chr11 36520815 36525823 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02135 - - gmx:100810228 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03561 5 45274338 45280508 Viun11g02135 11 36520815 36525823 PCT