Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03482 ATGTCGAGCTTACTTAATTCTTCTCTGAACGGGTCTGCTTCAAATCTTCCAGAAGGTGCTGCTGGGCGTTCCTTTGCTACGTCATTTTCTGGTTCTATTCAGGGATTGCACAACATTCATGGGAGCTATAATGTACCCAATATACCCAGTTCACTTACATCAAGAAACTCAACGTTAAATAGTGTTCCAACTGGGGGAGGAGTTCAACAACCTTCAGCAAGCCTTTCAAGTGGAAGATTTGCATCAAATAATCTACCCGTTGCTCTGTCACAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCAACAGTAGAGGAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGAATCACTAGTTCGATGGGAAACATGGTTGGTGCGGGGAACATTGGGAGGATAAGCTCTGGAGGATTGTCTGTTCCTGGCCTCGCTTCTCGGATAAATTTAGGTGGAAATGCTGGATCTGGTGGTTTAGGTGTACAAGGACAGAATCGATTGATAAGTGGTGTTCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCCTATCCTAGTGCTGGAGGTCCACTTTCTCAAAGTCATGTTCAAACAGTAAATAACTTGAACTCTATGGGGATGCTGAATGATGTGAATTCCGGTGACAGTTCACCTTTTGATATCAATGACTTCCCTCAACTGAGCACTCATCCTAGTTCTGCTGGTGGTCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTATTGGAGTTAGTCCCATTGTCCAACAAAACCAAGAGTTTAGTATTCAAAAGGAAGACTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTTTGCAATGGATATGTACCAGAAAGAACAACTTCATGATAACGCCGTGTCAATGATGCAATCTCAGCATTTCTCTCAGATGGGGCGATCTTCTGGTTTCAGTTTGGGGGGATCATATCCATCACATCGTACACAGCAGCATACCCCTTCAGTCAGTAGTAATGGTGTCTCCTTTTCATCTGTAAACAATCAAGACCTTCTCCATTTGCATGGAACAGATATGTTTCCATCTTCACACTCAACTTATCATTCCCAGACCAGTGGACCTCCTGGCATTGGACTAAGGCCTTTAAATTCTCCAAATACGGGTATGGGTTCATATGACCAGCTTATTCAGCAGTATCAACAGCAGCAGAACCAGTCGCAATTCCGCCTTCAGCAAATGTCAGCTGCAAACCAGTCTTTTAGGGATCAGGGCATGAAGTCCATGCAAAGTGCGCAATCTAGTCAAGATCCATTTGGTGCACTTGGCTTGTTCAGTGTAGTCCATATAAGTGATCCTGACCTGAAATATCTTGCTCATGGGATTGATCTCACAACGCTTGGGCTGAATTTGAATTCATCAGAAAATCTTTACAAGACTTTTCGATCACCATGGTCTGATGAACCGGCCAAGGGTGATCCAGAGTTCAGTGTGCTACAATGTTATTATGCTAAACAGCCGCCTGCCCTACATCAAGGTTATTTTTTGAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAACTATATGCAGCAAATGAACTTTACAAACGAGGTTGGTTTTATCATAAAGAACACCGTTTTTGGTTTATAAGAGTTGCCAACATGGAGCCGCTTGTCAAAACAAATACATACGAGAGAGGATCTTACCATTGTTTTGATCCAAATACCTTTGAGACAGTCCGGAAGGATAATTTTGTTCTTCATTATGAATTGGTGGAAAAGAGACCGTCTTTACCTCAACGTTAA 1836 0.4281 MSSLLNSSLNGSASNLPEGAAGRSFATSFSGSIQGLHNIHGSYNVPNIPSSLTSRNSTLNSVPTGGGVQQPSASLSSGRFASNNLPVALSQLSHGSSHGHSGVNSRGGLGVSPILGNAGPRITSSMGNMVGAGNIGRISSGGLSVPGLASRINLGGNAGSGGLGVQGQNRLISGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQTVNNLNSMGMLNDVNSGDSSPFDINDFPQLSTHPSSAGGPQGQLGSLRKQGIGVSPIVQQNQEFSIQKEDFPALPGFKGGNADFAMDMYQKEQLHDNAVSMMQSQHFSQMGRSSGFSLGGSYPSHRTQQHTPSVSSNGVSFSSVNNQDLLHLHGTDMFPSSHSTYHSQTSGPPGIGLRPLNSPNTGMGSYDQLIQQYQQQQNQSQFRLQQMSAANQSFRDQGMKSMQSAQSSQDPFGALGLFSVVHISDPDLKYLAHGIDLTTLGLNLNSSENLYKTFRSPWSDEPAKGDPEFSVLQCYYAKQPPALHQGYFLKFSVETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRFWFIRVANMEPLVKTNTYERGSYHCFDPNTFETVRKDNFVLHYELVEKRPSLPQR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03482 611 PANTHER CCR4 NOT-RELATED 33 605 IPR040168 GO:0030015
Viun5g03482 611 MobiDBLite consensus disorder prediction 314 342 - -
Viun5g03482 611 MobiDBLite consensus disorder prediction 54 76 - -
Viun5g03482 611 FunFam probable NOT transcription complex subunit VIP2 isoform X1 430 611 - -
Viun5g03482 611 Gene3D - 429 611 IPR038635 -
Viun5g03482 611 MobiDBLite consensus disorder prediction 217 252 - -
Viun5g03482 611 MobiDBLite consensus disorder prediction 217 247 - -
Viun5g03482 611 Pfam NOT2 / NOT3 / NOT5 family 480 600 IPR007282 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03482 Viun-Chr5 44862675 44871173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03482 K12605 - gmx:100776413 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03482 5 44862675 44871173 Viun11g02061 11 36063690 36073801 PCT