Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02061 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCTGATGGTGCCGGACGATCTTTTGCTACATCGTTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACCGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCCGGTTCACTCACATCGAGAAATTCAACTATAAATAATGTGCCATCGGGTGGCGTTCAACAACCCACTGGAAGCCTTTCTAGTGGAAGATTTACATCCAACAATCTACCAGTTGCATTGTCTCAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCACCAATAGAGGAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGAATCACTAGTTCTGTGGGAAACATGGTTGGTGGAGGGAATATCGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTTGCGTCTCGTCTAAATTTGGGTGCAAACAGTGGATCCAGTGGTTTAGGTATGCAAGGACAGAATCGATTAATGAGTGGTGTGCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCCAGCGCTGGAGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTAAGTAACTTGAACTCTATGGGAATGTTGAATGATGTGAATACCAATGACAGCTCTCCTTTTGATATCAATGACTTCCCTCAACTGACAAGTCGTCCTAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGCGTCAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGCGGTACTGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTACCAATGATGCAATCACAGCATTTCTCTATGGGAAGGTCTGCTGGTTTCAGCTTGGGGGGTACATATTCGTCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACAACCAAGATCTTCTCCATTTGCATGGATCAGATATTTTCCCATCTTCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGTATTGGATTAAGGCCTTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTTATCCAGCAATATCAACAGCATCAAAACCAGTCACAGTTCCGCCTACAAATGTCAGCTGTAAATCAATCTTTTAGGGATCAGGGCATGAAATCTATTCAAACCACACAACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTTATCAGGATGAGTGATCCTGACCTGACATCTCTTGCTCTTGGAATTGATCTAACTACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGTTCTCCATGGTCTGATGAACCTGCTAAGGGCGACCCAGAGTTTAATGTGCCACAATGTTATTATGCAAAACAGCCACCTGCTCTACATCAAGGATACTTTTCCAAGTTTTCAGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAATTATATGCCTCCAATGAGCTTTACAACAGAGGTTGGTTTTATCACAAGGAACATCGTTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGGGGATCTTATCACTGTTTCGAACCAAGCATATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAAGAGACCCCATCTGCCTCAACATTGA 1866 0.4309 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGSLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLSHGSSHGHSGVTNRGGLGVSPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSSGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDINDFPQLTSRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGTADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTTQPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYASNELYNRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFEPSIFETVRKDNFVLHYEMLEKRPHLPQH 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02061 621 MobiDBLite consensus disorder prediction 376 404 - -
Viun11g02061 621 MobiDBLite consensus disorder prediction 226 257 - -
Viun11g02061 621 MobiDBLite consensus disorder prediction 59 90 - -
Viun11g02061 621 PANTHER CCR4 NOT-RELATED 48 615 IPR040168 GO:0030015
Viun11g02061 621 Pfam NOT2 / NOT3 / NOT5 family 490 612 IPR007282 GO:0006355
Viun11g02061 621 MobiDBLite consensus disorder prediction 332 355 - -
Viun11g02061 621 MobiDBLite consensus disorder prediction 226 262 - -
Viun11g02061 621 Gene3D - 440 621 IPR038635 -
Viun11g02061 621 FunFam probable NOT transcription complex subunit VIP2 isoform X1 439 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02061 Viun-Chr11 36063690 36073801 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02061 K12605 - gmx:100807026 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02061 11 36063690 36073801 Viun11g02061 11 36063690 36073801 ECH
Viun5g03482 5 44862675 44871173 Viun11g02061 11 36063690 36073801 PCT