Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03476 ATGTTGTCCATTTTCCGTCAATACACCTTCGACAACTCGTTCGAGCAAGTGTACTTCTCGAACACGGTCCTGAAGGAGTATCAGATCGCACTCACCTTCGCCACCGATTACGACGAACTCGACCAACCCACCAACGGCATCTTCCGCCCCGTCTGGAACCTTGCGCAGGTGACACCAGAAGCCATCAAGCGGTTCAAGGAGAAGGCCGGGAGCATGGACGTCGAGGTGAAAGTGTTCATCTCCATCGGCAACCGAGGCAACCGTCACCCCTTCAAATCCCTCGACAGAGAAGCATGGATCGTCAACGCCACCGACTCACTCACGCGCCTCATCCAGGAGGTGAACCTCCAAGTGGACGGCATCGACGTGCTGTACGAGACAATCGATGCCTCACCCGATGACTTTATCTATTGCGTGAGAGGTCTGATAAAGAACCTGAAGGACAATGGGGTAATCACCGTAGCTTCCATTTCCCCCACCTTTAGCCTCAACACCGACTTCTACTCTACTTTGTACACTTCCGTGCCGTCCTTGTTTGATTATGTGGATTACCAGTTCCAGACGGAGCTTGATCGTGTTCCAGACCCTACTGCGCTGGCGCAGAGGTACGATGAACTCACCCAGATTTATCCCATAAGGAAGCTCTTGGCTGGGTACAGCGCAGAAAACGCCGACTGGGCCACTGTTTCACCCATCGTCTTCTTCCTCGGTGCCATGGACATTCTCCAGCAGAAAAATGCTCCTGGTGCTTCCATTTATTACCATAATTTCTCTGCTCCTCAATGA 786 0.5242 MLSIFRQYTFDNSFEQVYFSNTVLKEYQIALTFATDYDELDQPTNGIFRPVWNLAQVTPEAIKRFKEKAGSMDVEVKVFISIGNRGNRHPFKSLDREAWIVNATDSLTRLIQEVNLQVDGIDVLYETIDASPDDFIYCVRGLIKNLKDNGVITVASISPTFSLNTDFYSTLYTSVPSLFDYVDYQFQTELDRVPDPTALAQRYDELTQIYPIRKLLAGYSAENADWATVSPIVFFLGAMDILQQKNAPGASIYYHNFSAPQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03476 261 PANTHER CHITINASE 2-LIKE 4 259 - -
Viun5g03476 261 SUPERFAMILY (Trans)glycosidases 28 259 IPR017853 -
Viun5g03476 261 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 261 IPR001223 GO:0005975
Viun5g03476 261 Gene3D Glycosidases 2 260 - -
Viun5g03476 261 Pfam Glycosyl hydrolases family 18 51 230 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03476 Viun-Chr5 44813155 44814139 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03476 - - gmx:100776259 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03476 5 44813155 44814139 Viun5g03476 5 44813155 44814139 ECH
Viun5g03476 5 44813155 44814139 Viun11g02053 11 36013542 36014690 PCT