Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02053 ATGAAAATGAGAATTTCCATGACCAGAATCAGTTTAAAACCCTTGTTCTTGGTCTTCATGTTACTCACATCAACCCATGCAGGAACCATCTCCACCCCAAGTTCAAACCTATTCCGAGAATACATAGGAGCGGAGTTCAACAACGTTAAATTCTCCGATGTTCCCATCAACCCAAGTGTCCAATTCCACTTCATTCTCTCCTTCGCCATCGACTACGACACGGCATCAACCTCTTCTCCGACCAACGGAAAATTCAACGTCTTTTGGGACACCGACAACCTTAACCCTACCCAAGTCTCCGCCATCAAGGCCAAAAACCCAAACGTAAAAGTAGCCCTGAGTCTCGGAGGAGACAGCGTGGGAGGAGGCTCCGCTTACTTCAACCCCTCTTCGATCGATTCCTGGCTTTCCAACGCCGTTTCTTCACTCACCACCATAATCAAAGAGTACAACTTGGACGGAATCGACATCGACTACGAGCACTTCAAAACGGACCCCGAAACGTTCTCGGAGTGCGTGGGGAGGCTCATCAAGACGCTGAAATCGAACGGGGTCATAGAGTTTGCGTCCATTGCTCCTTTCGACGATGACCAAGTTCAGAGCCACTACTTGGCCTTGTGGAAGAGTTACGGGAACCTCATCGACTACGTTAACTTTCAGTTTTATGCGTACGACAAGGGCACTGGTGTGGCACAGTTCATCGACTACTTCAACACGCAGAGTTCGAATTACGAAGGTGGAAAGGTGCTGGTGAGTTTCATCAGTGATGGGAGTGGTGGGTTGGCTCCCAATGATGGGTTCTTCACAGCATGTCATACGTTAAAAACTCAGAATAAGCTTCATGGTATCTTTGTCTGGTCTGCTGATGACTCCATGGGAAATGGTTTTCGTTTTGAGAAGCAATCACAGGCCCTTTTAGCTTTACCCTAG 930 0.4796 MKMRISMTRISLKPLFLVFMLLTSTHAGTISTPSSNLFREYIGAEFNNVKFSDVPINPSVQFHFILSFAIDYDTASTSSPTNGKFNVFWDTDNLNPTQVSAIKAKNPNVKVALSLGGDSVGGGSAYFNPSSIDSWLSNAVSSLTTIIKEYNLDGIDIDYEHFKTDPETFSECVGRLIKTLKSNGVIEFASIAPFDDDQVQSHYLALWKSYGNLIDYVNFQFYAYDKGTGVAQFIDYFNTQSSNYEGGKVLVSFISDGSGGLAPNDGFFTACHTLKTQNKLHGIFVWSADDSMGNGFRFEKQSQALLALP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02053 309 Gene3D Glycosidases 34 308 - -
Viun11g02053 309 Pfam Glycosyl hydrolases family 18 63 229 IPR001223 GO:0005975
Viun11g02053 309 PRINTS 2-S globulin family signature 99 117 IPR000677 -
Viun11g02053 309 PRINTS 2-S globulin family signature 269 288 IPR000677 -
Viun11g02053 309 PRINTS 2-S globulin family signature 35 48 IPR000677 -
Viun11g02053 309 PRINTS 2-S globulin family signature 82 97 IPR000677 -
Viun11g02053 309 SUPERFAMILY (Trans)glycosidases 35 301 IPR017853 -
Viun11g02053 309 CDD GH18_narbonin 37 291 - -
Viun11g02053 309 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 152 160 IPR001579 GO:0004553|GO:0005975
Viun11g02053 309 PANTHER CHITINASE 2-LIKE 14 307 - -
Viun11g02053 309 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 36 309 IPR001223 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02053 - - vum:124843731 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03476 5 44813155 44814139 Viun11g02053 11 36013542 36014690 PCT