Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03396 ATGAGCGAGACGAGTTCATCGGCGCATGACCCCGAACCTCCCATCCGGCTCAACCTGCCTCCCCTCTCACCGAGCCTCTTCGACGCCGAACCATCGGAGCTCCAACAACCCAATGGATCCGCCGTCCGACACTCCTCCGATCCGTCCAGCCCTACTAGCAGCGGTTACGCCGGCGAGCGGGGTAGCAGCACCGCCACAACTGTCTCCCAGGTTGAAGATATCCTTCATAACGAAATTCAGGAGATCACCATCCACGATCCCCAACCTCTCTCCCACTCCTCTTGGCTTCCCGGAAAACGACACAGCGATGAGGATGATGCTTCCATTTCATGGAGGAGAAGGAAGAAACATTTTTTTGTTCTTAGTCATTCTGGCAAACCAATATATTCTAGGTACGGAGACGAACACAAGCTTGCTGGTTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTGGAAAATGGGGGCGATAATGTCAAATTGGTGAGGGCTGGAAAACATCAGGTGGTTTTTCTTGTAAAAGGACCAATTTACTTGGTCTGCATCAGCTGTACGGAAGAACCCTATGAGTCCCTCAGGGGGCAGTTGGAGCTTATTCATGGCCAGATTATTGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCGAAGTTTGATATGACACCCTTGCTTGGTGGAACAGAACTTCTTTTCTCTTCACTAGTCCACTCTTTTAGTTGGAACCCGGCTACATTTCTTCATGCCTATACTTGTCTACCTCTTGCATATGCAACAAGGCAAGCTGCTGGTGCCATCTTGCAAGACTCTGCTGATTCTGGTGTTCTGTTTGCAATTCTGATGTGCAGACACAAGGTAATCAGTCTAGTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTCTTGGCCAACTTTGTTATGTCATCCGAGTCTTTTAGGACTTCAGAAGCTTTTTCTCCTGTTTGCTTGCCACGATACAATGCTTTGGCATTTTTGTACGCTTACATCCACTTTTTTGACGATGATACGTATTTGATGTTGCTGACCACGAGTTCTGATGCATTTTACCATCTTAAGGATTGCAGGATTAGTATCGAAAATGTCCTTTTGAAGTCAAATGTCCTCAGTGAAGCTCAGAGATCCTTGATAGATGGTGGGATGCGTGTTGAGGATCTTCCACCCTTACCTCATTCTGGATCTTCACATTTAGGTCAGCATAGGCTTCCATCAGATTCTCCTGAAAGATTAAGAGAACCTGATTGTGGCATTGGTGGTGCTGCTGGGTTGTGGCATTTCATATATCGTAGCATTTATCTAGATCAATATATATCCTCAGAGTTCTCATCACCTATTAATACTCCTAAGCAGCAGAAAAGATTGTATAGAGCTTACCAAAAACTTTTTGCATCCATGCATGATAAAGGACTTGGGCCACACAAAACCCAGTTTAGAAAGGATGAAAACTACGTTCTGCTCTGTTGGGTAACACCAGATTTTGAGCTTTATGCTGCATTTGATCCCCTTGCTGACAAGGCCTTGGCAATAAAGACTTGCAATCGGGTGTGTCAATGGGTAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGTCCCTTTTCGTGGTGA 1644 0.4507 MSETSSSAHDPEPPIRLNLPPLSPSLFDAEPSELQQPNGSAVRHSSDPSSPTSSGYAGERGSSTATTVSQVEDILHNEIQEITIHDPQPLSHSSWLPGKRHSDEDDASISWRRRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDNVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLELIHGQIIVILTKSVNRCFEKNPKFDMTPLLGGTELLFSSLVHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDSADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSEAFSPVCLPRYNALAFLYAYIHFFDDDTYLMLLTTSSDAFYHLKDCRISIENVLLKSNVLSEAQRSLIDGGMRVEDLPPLPHSGSSHLGQHRLPSDSPERLREPDCGIGGAAGLWHFIYRSIYLDQYISSEFSSPINTPKQQKRLYRAYQKLFASMHDKGLGPHKTQFRKDENYVLLCWVTPDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGASPFSW 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03396 547 PANTHER SAND PROTEIN-RELATED 36 545 IPR004353 GO:0006623
Viun5g03396 547 MobiDBLite consensus disorder prediction 399 420 - -
Viun5g03396 547 Pfam First Longin domain of FUZ, MON1 and HPS1 116 237 IPR043972 GO:0016192
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 525 545 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 272 285 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 296 312 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 512 525 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 321 344 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 219 231 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 496 510 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 116 133 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 349 375 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 248 269 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 168 182 IPR004353 GO:0006623
Viun5g03396 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 134 154 IPR004353 GO:0006623
Viun5g03396 547 Pfam Third Longin domain of FUZ, MON1 and HPS1 433 533 IPR043970 GO:0016192
Viun5g03396 547 Pfam Second Longin domain of FUZ, MON1 and HPS1 277 367 IPR043971 GO:0016192
Viun5g03396 547 MobiDBLite consensus disorder prediction 82 107 - -
Viun5g03396 547 MobiDBLite consensus disorder prediction 29 67 - -
Viun5g03396 547 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03396 Viun-Chr5 44205991 44211755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03396 K20195 - gmx:100816794 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03396 5 44205991 44211755 Viun5g03396 5 44205991 44211755 ECH
Viun5g03396 5 44205991 44211755 Viun11g01938 11 35180969 35186973 PCT