Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01938 ATGAACGACGACGAAACAGAGTCCGAGGGTGAGATTAGGGCTTCCGTCGAGCCCGCTTCGGAGGACGCTCCATCCAGCCCCGGTAGCAGCGGGTACGTCGGCGAAGGAGGCAGCACCAGCGCAACCACTGGTTCGCAATTCGAAATTGAGCACGAAGAAATAGAAGAGGACACCACAATTGATATGGACAGAATCTCGATTTCCGATTCCCACGCGTCGTGGATTCCCGGCAAACGCCACTTCGATGAGGATGATGGTTCCATATCGTGGAGGAAGAGGAAGAAACATTTCTTCGTTCTCAGTCATTCCGGCAAACCTATATATTCCAGGTATGGAGATGAACACAGACTTGCAGGGTTTTCAGCAACTTTGCAAGCAATTATTTCCTTTGTTGAGAACGGGGGCGACTCTGTCAAATTGGTGAGGGCTGGAAGGCATCAGGTGATTTTTCTAGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTCCACAGAAGAACCTTACGCTTCATTAAGGGGGCAGTTAGAGCTAATTTATGGACAGATGCTTGTTATACTAACAAAATCAATAAATAGATGTTTTGAGAAGAACCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGAAATTGTCTTCTCTTCTCTAATACACTCCTTCAGCTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTCCCTCTTGCATATGCAACAAGGCAAGCTGCAGGAGCTATTTTGCAAGATGTTGCTGATTCAGGTGTTTTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTCGTTGGTGCTCAGAAAGATTCCCTTCATCCAGATGATATACTGCTTTTGGCCAACTTTGTCATGTCATCTGAATCCTTCAGGACATCAGAATCATTTTCTCCAATTTGCTTGCCAAGATATAACCCTTCAGCATTTTTGTATGCATATATCCATTACTTCGATGATGACACATACTTGGTGTTACTAACCACTAATTCTGATGCATTTTATCATCTTAAGGATTGCAGGATTCGTGTTGAAAATGTTCTTTTGAAGTCATGTGTCCTTAGTGAAGTTCAGAGATCCTTGCTAAACGGGGGAATGCATGTTGAAGACTTGCCACCTATATCTCATTCTGGATCATCTCATTTGGGCCAGCACATGCTTCCATCAGATTCTCCTGACAGATTTAGGGAAGCTAATTCTGGCATTGGGGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATATCTTAACCAGTATGTCTCCTCGGAATTCCCATCATCAATTAATACGCCTCAGCTGCAAAAAAAATTGTATAGAGCTTACGAGAAACTTTTTGCATCCATGCATGATAAAGGAATTGGACCGCACAAAACTCAATTTAGAAGAGATGAAAACTACGTTCTTCTCTGTTGGGTGACACCGGATTTTGAGCTCTACGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATCAAGACGTGCAACCATGTTTGTCAGTGGATAAAAGATGTGGAAAATGAAATATTTTTGTTAGGAGCTAGCCCCTTTTCATGGTGA 1581 0.4371 MNDDETESEGEIRASVEPASEDAPSSPGSSGYVGEGGSTSATTGSQFEIEHEEIEEDTTIDMDRISISDSHASWIPGKRHFDEDDGSISWRKRKKHFFVLSHSGKPIYSRYGDEHRLAGFSATLQAIISFVENGGDSVKLVRAGRHQVIFLVKGPIYLVCISSTEEPYASLRGQLELIYGQMLVILTKSINRCFEKNPKFDMTPLLGGTEIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKDSLHPDDILLLANFVMSSESFRTSESFSPICLPRYNPSAFLYAYIHYFDDDTYLVLLTTNSDAFYHLKDCRIRVENVLLKSCVLSEVQRSLLNGGMHVEDLPPISHSGSSHLGQHMLPSDSPDRFREANSGIGGPAGLWHFIYRSIYLNQYVSSEFPSSINTPQLQKKLYRAYEKLFASMHDKGIGPHKTQFRRDENYVLLCWVTPDFELYAAFDPLADKALAIKTCNHVCQWIKDVENEIFLLGASPFSW 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01938 526 PANTHER SAND PROTEIN-RELATED 13 524 IPR004353 GO:0006623
Viun11g01938 526 Pfam First Longin domain of FUZ, MON1 and HPS1 95 216 IPR043972 GO:0016192
Viun11g01938 526 MobiDBLite consensus disorder prediction 1 60 - -
Viun11g01938 526 Pfam Second Longin domain of FUZ, MON1 and HPS1 256 348 IPR043971 GO:0016192
Viun11g01938 526 Pfam Third Longin domain of FUZ, MON1 and HPS1 412 513 IPR043970 GO:0016192
Viun11g01938 526 MobiDBLite consensus disorder prediction 22 47 - -
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 113 133 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 95 112 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 275 291 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 227 248 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 300 323 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 147 161 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 251 264 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 328 354 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 475 489 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 198 210 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 491 504 IPR004353 GO:0006623
Viun11g01938 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 504 524 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01938 Viun-Chr11 35180969 35186973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01938 K20195 - gmx:100816794 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03396 5 44205991 44211755 Viun11g01938 11 35180969 35186973 PCT