Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03254 ATGAACATGGCAGATATAATATCTTGCTTCAATGAAAACGCAGTGAATGTGTCACACTCTTCGTGTTCTAGCTACTCAAACAACGCGTGCATATCTCCCACTGTTACACCTTCAACGCAGAACTCGGTGACCTCTGTCTACAAAACCACCCTCTCCAACCAAAAGCAGGTTCTCATCACAGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCACCGTGACGTTCGGCGAAGACAACCCTTTGGCACCATCTTTCAGGCTCAACACAAATTCGAGGTTTTTCAGGAAAAAGAAAGGAAGCAAGGTCCTGGAATCCGAGGAGTCCAAGGTTGAAGTGTTCTGGGACCTGTCGAAGGCCAAGTACGAGACCGGTCCCGAACCTGTTGAAGGGTTTTACGTGGCGATTCTGGTGGATGCAGAGATAGGGCTCGTTCTGGGAGAAGAAGATGTGGTGAAGAAGTTCAAAACGAGAACCCTTTTGGCCAAGGTTTCGCTTCTGTCACGGCGTGAACATTGCTCCGGGAACGCCGTTTACGCCACCAAGGCTCAGTTCTGTGACACCGGAACTTGGCACGACATTTTAATCCGGTGCAGTGGGGAGAATGAGGGGTTAAAGGCTCCTGTTTTGTCCGTTTGCATTGATAAGAAAACGGTGATCCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGAAACCAAACGATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGGTATGCAGTGTTCATGTTCAGAACCAGAAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAAAAGATTGCACAGAAAGACAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATGA 903 0.4784 MNMADIISCFNENAVNVSHSSCSSYSNNACISPTVTPSTQNSVTSVYKTTLSNQKQVLITVTWCKSHSNQGLTVTFGEDNPLAPSFRLNTNSRFFRKKKGSKVLESEESKVEVFWDLSKAKYETGPEPVEGFYVAILVDAEIGLVLGEEDVVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKST 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03254 300 PANTHER EXPRESSED PROTEIN 6 298 IPR008586 -
Viun5g03254 300 Pfam Plant protein of unknown function (DUF868) 38 298 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03254 Viun-Chr5 43215615 43217359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03254 3 299 EF-hand Containing Proteins AT5G28150 39.934 4.57e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03254 - - gmx:100798692 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03254 5 43215615 43217359 Viun5g03254 5 43215615 43217359 ECH
Viun5g03254 5 43215615 43217359 Viun11g01786 11 33846605 33847905 PCT