Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01786 ATGAGAGACTTTGTTACTTGCTTCAGCGAGAACGCTGTTAACGTGTCTCATTCTTCAATCTCGTGTTCTTCTTATTCGAACAACGCATGCATTTCTCCCTCCAACGTCGCACCCTCCACCCAGAACTCTGTTTCCAGCGTCTACAAAGTGATTCTCTCAACGTTGAAGCAAATTCTGGTGACGGTCACATGGTGTAGGAGCCACTCCAACCAAGGACTCGCCATAACCTTCAACCACGAGGACCCTCCACCCTTTAGACTCAACACCAATTCACGCTTTTTCAGGAAGAAAAAGGGCACCAAAATCCTCGAACCCTTTTCTTCTGACTCATCCAAGGTCGAAATTTTGTGGGATCTTTCAAACGCCAAGTACGAATCCGGTCCCGAACCGGTTCAGGGCTTTCACCTTGTGATCATCATCGACTCGGAAATTGGTCTGGTTCTCGGTGAAACCGCTGAAGAAACGGTTCTTCTTTCGAAGAAGCTCAATTTCAGAAGCACGGGTTTGGCGGCGGCTAAGGTTTCTCTTTTGTCGCGAACAGAGCATTGTTCTGGGAGCACCCTTTACTCCACCAAGGCTCAGTTCTGCGACACCGGCACGTGGCACGATGTTATGATCAGATGCAGCGTGGAGAAGGAGAATGAAGGGTTGTTCAAGTCACCGGTTTTGTGCGTTTGCATAGATAAGAAGACCGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGAGGGAATCAAACGCTTTTCGTTGATGGGTTGCTGGTTGATTTGCTTTGGGATGTTCATGACTGGTTCTTCACCCCTTCTTCTTCTTCTTCTTCCTCTTCTTCTGGGTATGCAGTGTTCATGTTCAGGACTAGGAGTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAGAATGCACAGAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTACATAA 963 0.4735 MRDFVTCFSENAVNVSHSSISCSSYSNNACISPSNVAPSTQNSVSSVYKVILSTLKQILVTVTWCRSHSNQGLAITFNHEDPPPFRLNTNSRFFRKKKGTKILEPFSSDSSKVEILWDLSNAKYESGPEPVQGFHLVIIIDSEIGLVLGETAEETVLLSKKLNFRSTGLAAAKVSLLSRTEHCSGSTLYSTKAQFCDTGTWHDVMIRCSVEKENEGLFKSPVLCVCIDKKTVIRVKRLQWNFRGNQTLFVDGLLVDLLWDVHDWFFTPSSSSSSSSSGYAVFMFRTRSGMDSRLWLEEKNAQKDKDRVEFSLLIYACKTT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01786 320 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Viun11g01786 320 Pfam Plant protein of unknown function (DUF868) 39 318 IPR008586 -
Viun11g01786 320 PANTHER EXPRESSED PROTEIN 4 318 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01786 Viun-Chr11 33846605 33847905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01786 1 319 EF-hand Containing Proteins AT5G28150 33.230 2.55e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01786 - - gmx:100794621 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03254 5 43215615 43217359 Viun11g01786 11 33846605 33847905 PCT