Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03251 ATGCTAGCAATGGGGGAATTCAAACACTTTGTGATTGTTAAGTTCAAGGAAGGTGTGGCAGTTGATGAGCTCACAAAAGGGATGGAGAAGTTGGTCTCAGAGATTGATGCTGTCAAGTCCTTTGAATGGGGAAGGGACATTGAAAGCTTAGATGTGCTGAGACAAGGTTTCACTCATGCCTTTTTAATGACATTCAACAAGAAAGAAGACTTTGCTGCATTTCAAAGCCACCCGAATCATGTTGAGTTTTCCACAACATTTTCAGCAGCAATTGAGAACATTGTGCTGCTGGATTTCCCATCTACTATTGTCAAGGCCCCAGCATGA 327 0.4251 MLAMGEFKHFVIVKFKEGVAVDELTKGMEKLVSEIDAVKSFEWGRDIESLDVLRQGFTHAFLMTFNKKEDFAAFQSHPNHVEFSTTFSAAIENIVLLDFPSTIVKAPA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03251 108 SMART Dabb_2 7 101 IPR013097 -
Viun5g03251 108 ProSiteProfiles Stress-response A/B barrel domain profile. 7 99 IPR013097 -
Viun5g03251 108 SUPERFAMILY Dimeric alpha+beta barrel 4 101 IPR011008 -
Viun5g03251 108 Gene3D - 3 108 - -
Viun5g03251 108 PANTHER - 5 102 IPR044662 -
Viun5g03251 108 Pfam Stress responsive A/B Barrel Domain 8 100 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03251 Viun-Chr5 43184713 43185835 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03251 - - gmx:100306664 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03251 5 43184713 43185835 Viun5g03251 5 43184713 43185835 ECH
Viun5g03251 5 43184713 43185835 Viun11g01778 11 33789085 33790502 PCT